| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
Click here to switch to the map view.
The map label for this gene is 85059794
Identifier: 85059794
GI number: 85059794
Start: 3084950
End: 3085447
Strand: Reverse
Name: 85059794
Synonym: SG1816
Alternate gene names: NA
Gene position: 3085447-3084950 (Counterclockwise)
Preceding gene: 85059795
Following gene: 85059793
Centisome position: 73.97
GC content: 56.02
Gene sequence:
>498_bases ATGACCGGTTCATCGATTCTCTTTACGCCCGATTTCGGGTACGCCGGCGCATTAACGCGGCCTTCCCATTCCACTGTCGA GCCGGTAGTGATGAGCACCGACAAACCCTTCGCCGGTGACGGCCTGATGGGAAAAAAGGTAGCCGGTAAATTTGTGCCTA TCTCGGAAGGGGATGCGGTCACCGTTTTTTTCGGTATTCGTGTGCGCTCTTATCCGTTTATGTCGGACAGCGATTTGGCA CGACAGCTAACCACACCGTACAACCATACCGGGGATGCGCTGACCCGCGGCTATATCGCCGTCAAGGTCAATGCGGGCAC GGTCACGGATAACGTCCCCGTTTTTGTCCGCGTCAAGGGTGGCACCAAAGAGAAACCGATCGGCGGCTTTGAAGCCGAGG CCGACAAGACCGAAGGCAACACGGTAGCGCTCACCAACGCCCGGTTTATCGGTGCTGCAGATGCTAATGGCATCGCAGAA GTGGCCTTCAACATTTAA
Upstream 100 bases:
>100_bases AACAGCAGATGCCCGCCTTCAATCTAGCCGGGTGTAGCAACACCATCGCCGAACTGAATAAAACCAAAGCAGATTTCTGG AAAAACAAAGGAGCCACGGC
Downstream 100 bases:
>100_bases GGAACGCACACGTCATGTATACGTTTGACCAAAAGACTTTTGATCATAAGACCGCCGACAGTGCGGGCGCTTTTTTACTG GGCCAGCTTGAACGGCTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MTGSSILFTPDFGYAGALTRPSHSTVEPVVMSTDKPFAGDGLMGKKVAGKFVPISEGDAVTVFFGIRVRSYPFMSDSDLA RQLTTPYNHTGDALTRGYIAVKVNAGTVTDNVPVFVRVKGGTKEKPIGGFEAEADKTEGNTVALTNARFIGAADANGIAE VAFNI
Sequences:
>Translated_165_residues MTGSSILFTPDFGYAGALTRPSHSTVEPVVMSTDKPFAGDGLMGKKVAGKFVPISEGDAVTVFFGIRVRSYPFMSDSDLA RQLTTPYNHTGDALTRGYIAVKVNAGTVTDNVPVFVRVKGGTKEKPIGGFEAEADKTEGNTVALTNARFIGAADANGIAE VAFNI >Mature_164_residues TGSSILFTPDFGYAGALTRPSHSTVEPVVMSTDKPFAGDGLMGKKVAGKFVPISEGDAVTVFFGIRVRSYPFMSDSDLAR QLTTPYNHTGDALTRGYIAVKVNAGTVTDNVPVFVRVKGGTKEKPIGGFEAEADKTEGNTVALTNARFIGAADANGIAEV AFNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17339; Mature: 17208
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSSILFTPDFGYAGALTRPSHSTVEPVVMSTDKPFAGDGLMGKKVAGKFVPISEGDAV CCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCEE TVFFGIRVRSYPFMSDSDLARQLTTPYNHTGDALTRGYIAVKVNAGTVTDNVPVFVRVKG EEEEEEEEEECCCCCCCHHHHHHCCCCCCCCCCEECCEEEEEEECCEEECCCCEEEEECC GTKEKPIGGFEAEADKTEGNTVALTNARFIGAADANGIAEVAFNI CCCCCCCCCCCCCCCCCCCCEEEEECCEEEECCCCCCEEEEEEEC >Mature Secondary Structure TGSSILFTPDFGYAGALTRPSHSTVEPVVMSTDKPFAGDGLMGKKVAGKFVPISEGDAV CCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCEE TVFFGIRVRSYPFMSDSDLARQLTTPYNHTGDALTRGYIAVKVNAGTVTDNVPVFVRVKG EEEEEEEEEECCCCCCCHHHHHHCCCCCCCCCCEECCEEEEEEECCEEECCCCEEEEECC GTKEKPIGGFEAEADKTEGNTVALTNARFIGAADANGIAEVAFNI CCCCCCCCCCCCCCCCCCCCEEEEECCEEEECCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA