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The map label for this gene is rnfH

Identifier: 85059780

GI number: 85059780

Start: 3070245

End: 3070529

Strand: Reverse

Name: rnfH

Synonym: SG1802

Alternate gene names: 85059780

Gene position: 3070529-3070245 (Counterclockwise)

Preceding gene: 85059781

Following gene: 85059776

Centisome position: 73.61

GC content: 60.0

Gene sequence:

>285_bases
ATGCCTGACATCCGGGTCGAGGTCGTTTACGCCCTGCCGGAGCGCCAGTATCTGCGACAGCTGGTGCTGGAGGAGGGGAG
TACCCTGGAGCAGGCGATTCACGCATCGGGTCTTCTGGCACTACGGCAGGATATCGATCTCAGCGTGAATAAAGTGGGCA
TCTTCAGCCGGCCCGCCAAATTGGAGGATACACTCAGTGACGGCGACCGGGTGGAGATCTACCGGCCGTTGCTTATCGAT
CCCAAGGAACTGCGCCGTCAGCGCGCGGATCGCACGCGAAAATAA

Upstream 100 bases:

>100_bases
TTCAAGAGCAAGCTGATTGAACTGGCGTTTGGGCGTATTTTCAAGGAGATGGCGAACAGCATGGTCATGGCGTTCACCCG
CCGGGCCAAAGAGGTTTACC

Downstream 100 bases:

>100_bases
CTCGCCGCCATAGTATCGGTTAACGCCACTTATTAACTGGTGCTGGGGCCTTCGAGCGTCGGTTTGTTGTCTATATGCGT
CAGGATGTCGCTGCTGTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MPDIRVEVVYALPERQYLRQLVLEEGSTLEQAIHASGLLALRQDIDLSVNKVGIFSRPAKLEDTLSDGDRVEIYRPLLID
PKELRRQRADRTRK

Sequences:

>Translated_94_residues
MPDIRVEVVYALPERQYLRQLVLEEGSTLEQAIHASGLLALRQDIDLSVNKVGIFSRPAKLEDTLSDGDRVEIYRPLLID
PKELRRQRADRTRK
>Mature_93_residues
PDIRVEVVYALPERQYLRQLVLEEGSTLEQAIHASGLLALRQDIDLSVNKVGIFSRPAKLEDTLSDGDRVEIYRPLLIDP
KELRRQRADRTRK

Specific function: Unknown

COG id: COG2914

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0125 (rnfH) family

Homologues:

Organism=Escherichia coli, GI87082139, Length=93, Percent_Identity=69.8924731182796, Blast_Score=134, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNFH_SODGM (Q2NRZ8)

Other databases:

- EMBL:   AP008232
- RefSeq:   YP_455482.1
- ProteinModelPortal:   Q2NRZ8
- SMR:   Q2NRZ8
- STRING:   Q2NRZ8
- GeneID:   3866805
- GenomeReviews:   AP008232_GR
- KEGG:   sgl:SG1802
- NMPDR:   fig|343509.6.peg.3828
- eggNOG:   COG2914
- HOGENOM:   HBG700644
- OMA:   PKDVRRK
- PhylomeDB:   Q2NRZ8
- ProtClustDB:   PRK01777
- BioCyc:   SGLO343509:SG1802-MONOMER
- HAMAP:   MF_00460
- InterPro:   IPR005346

Pfam domain/function: PF03658 UPF0125

EC number: NA

Molecular weight: Translated: 10855; Mature: 10723

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDIRVEVVYALPERQYLRQLVLEEGSTLEQAIHASGLLALRQDIDLSVNKVGIFSRPAK
CCCCEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
LEDTLSDGDRVEIYRPLLIDPKELRRQRADRTRK
CHHHCCCCCEEEEECCCEECHHHHHHHHHHCCCC
>Mature Secondary Structure 
PDIRVEVVYALPERQYLRQLVLEEGSTLEQAIHASGLLALRQDIDLSVNKVGIFSRPAK
CCCEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
LEDTLSDGDRVEIYRPLLIDPKELRRQRADRTRK
CHHHCCCCCEEEEECCCEECHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA