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The map label for this gene is recO

Identifier: 85059763

GI number: 85059763

Start: 3049942

End: 3050724

Strand: Reverse

Name: recO

Synonym: SG1785

Alternate gene names: 85059763

Gene position: 3050724-3049942 (Counterclockwise)

Preceding gene: 85059764

Following gene: 85059762

Centisome position: 73.14

GC content: 60.41

Gene sequence:

>783_bases
ATGGACGGTTGGCAACGCGCCTTCGTACTCCATGCTCGCCCTTACAGCGAAACCAGCCTGCTTCTGGACTTTTTCACCGA
ACAGCAAGGGCGGGTGCGCGTTTTGGCCAAAGGCGCGCGTTCCCGCCGCTCCGCGCTTAAAGGGGTACTACAGCCTTTTA
CGCCATTACTGGCCCGCTGGAGCGGCCGCGGCGAAGTAAAAACCCTGCGTAGCGCCGAGCCCGTCTCGCTGGGGCTGCCG
CTCAGCGGTCTGATGCTGTATAGCGGACTCTATATCAACGAGCTGCTCTCACGCGTGCTCGACCATGAAACCGATTACTC
TAAGCTGTTTTACGATTACCTCCACTGTTTGCAATGGCTGGCGGGCGCCACGGGTTCGCCGGAGCCGGCCCTGCGTCGCT
TTGAGCTGGCGTTGCTGTCGCATTTGGGTTACGGCGTCGATTTTCTCCACTGTGCCGGCAGTGGTGAGCCGGTCGATGAT
GCGATGACCTACCGTTACCGGGAAGAGAAAGGTTTTACCGCCAGCGTACTTTTAGATCGCTACAGCTTCAGCGGGCGAGA
GCTGCGGGCCTTGGCAGAGGGGGAGTTTCCCGATATTGATACGTTGCGCGCCGCCAAGCGGTTCACCCGTATGGCGCTCA
AACCCTATTTAGGCGGCAAACCGTTAAAGAGCCACGAGCTGTTTCGTCAGTTTCTTGACCGGCGCCCACAGGCTAGCGCC
GGCGTGGCTGCCGCGCGCAAGGCGGGGGGAGACGGGTCTGACGGTGACGAAGGCGAGCAATAA

Upstream 100 bases:

>100_bases
GGTGCATCTGGAACTGTGGGTGAAGGTGAAATCGGGCTGGGCCGATGATGAACGTGCTCTGCGCAGTCTGGGCTACGTCG
ACGATCTGTAGGCAACGCTG

Downstream 100 bases:

>100_bases
ACTGGTCTGGGCTACAGCGCTGGTTTACACTGCGACACAATACCTACCAATGTAAGGGGAAAGGGATGTCTGAATTGTTG
CTGGGCGTGAATATCGATCA

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MDGWQRAFVLHARPYSETSLLLDFFTEQQGRVRVLAKGARSRRSALKGVLQPFTPLLARWSGRGEVKTLRSAEPVSLGLP
LSGLMLYSGLYINELLSRVLDHETDYSKLFYDYLHCLQWLAGATGSPEPALRRFELALLSHLGYGVDFLHCAGSGEPVDD
AMTYRYREEKGFTASVLLDRYSFSGRELRALAEGEFPDIDTLRAAKRFTRMALKPYLGGKPLKSHELFRQFLDRRPQASA
GVAAARKAGGDGSDGDEGEQ

Sequences:

>Translated_260_residues
MDGWQRAFVLHARPYSETSLLLDFFTEQQGRVRVLAKGARSRRSALKGVLQPFTPLLARWSGRGEVKTLRSAEPVSLGLP
LSGLMLYSGLYINELLSRVLDHETDYSKLFYDYLHCLQWLAGATGSPEPALRRFELALLSHLGYGVDFLHCAGSGEPVDD
AMTYRYREEKGFTASVLLDRYSFSGRELRALAEGEFPDIDTLRAAKRFTRMALKPYLGGKPLKSHELFRQFLDRRPQASA
GVAAARKAGGDGSDGDEGEQ
>Mature_260_residues
MDGWQRAFVLHARPYSETSLLLDFFTEQQGRVRVLAKGARSRRSALKGVLQPFTPLLARWSGRGEVKTLRSAEPVSLGLP
LSGLMLYSGLYINELLSRVLDHETDYSKLFYDYLHCLQWLAGATGSPEPALRRFELALLSHLGYGVDFLHCAGSGEPVDD
AMTYRYREEKGFTASVLLDRYSFSGRELRALAEGEFPDIDTLRAAKRFTRMALKPYLGGKPLKSHELFRQFLDRRPQASA
GVAAARKAGGDGSDGDEGEQ

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

Organism=Escherichia coli, GI2367140, Length=235, Percent_Identity=78.7234042553192, Blast_Score=387, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_SODGM (Q2NS15)

Other databases:

- EMBL:   AP008232
- RefSeq:   YP_455465.1
- ProteinModelPortal:   Q2NS15
- STRING:   Q2NS15
- GeneID:   3866529
- GenomeReviews:   AP008232_GR
- KEGG:   sgl:SG1785
- NMPDR:   fig|343509.6.peg.3807
- eggNOG:   COG1381
- HOGENOM:   HBG645116
- OMA:   SILQPFQ
- PhylomeDB:   Q2NS15
- ProtClustDB:   PRK00085
- BioCyc:   SGLO343509:SG1785-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 28994; Mature: 28994

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGWQRAFVLHARPYSETSLLLDFFTEQQGRVRVLAKGARSRRSALKGVLQPFTPLLARW
CCCHHEEEEEECCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
SGRGEVKTLRSAEPVSLGLPLSGLMLYSGLYINELLSRVLDHETDYSKLFYDYLHCLQWL
CCCCCHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AGATGSPEPALRRFELALLSHLGYGVDFLHCAGSGEPVDDAMTYRYREEKGFTASVLLDR
HCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHH
YSFSGRELRALAEGEFPDIDTLRAAKRFTRMALKPYLGGKPLKSHELFRQFLDRRPQASA
HCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHH
GVAAARKAGGDGSDGDEGEQ
HHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MDGWQRAFVLHARPYSETSLLLDFFTEQQGRVRVLAKGARSRRSALKGVLQPFTPLLARW
CCCHHEEEEEECCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
SGRGEVKTLRSAEPVSLGLPLSGLMLYSGLYINELLSRVLDHETDYSKLFYDYLHCLQWL
CCCCCHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AGATGSPEPALRRFELALLSHLGYGVDFLHCAGSGEPVDDAMTYRYREEKGFTASVLLDR
HCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHH
YSFSGRELRALAEGEFPDIDTLRAAKRFTRMALKPYLGGKPLKSHELFRQFLDRRPQASA
HCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHH
GVAAARKAGGDGSDGDEGEQ
HHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA