| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is yfgM [H]
Identifier: 85059736
GI number: 85059736
Start: 3013431
End: 3014045
Strand: Reverse
Name: yfgM [H]
Synonym: SG1758
Alternate gene names: 85059736
Gene position: 3014045-3013431 (Counterclockwise)
Preceding gene: 85059737
Following gene: 85059735
Centisome position: 72.26
GC content: 62.11
Gene sequence:
>615_bases GTGGAAGTCTACAGCACTGATAACGAACAGCGCGATGCGCTGCGCCGTTTCTTTGTCGATAACGGCAAGGCGCTGGCGAT AGGCGTCGTGCTCGGCGTTGGAGCTCTGGTGGGCTGGCGTTACTGGCATAATCACCATAACGACGCGATGATGGCGGCAT CAAGCGCCTGGCAGCCGGTGAACGCCGGCCTGAGCGGCCAGGCGGCCCAGCCGCAGCTGGACGCCGCGCAGCATTTTGCC GACGCCAACGATAACAACTATGGCGCGCTAACCTCGATGGGGCTGGCGCGGCAATTCGCCGAGCGGGGCGATTTCCCCGC CGCGGAGAAGCAGTTGCAAAAAGCGCTTGGCCAGACCCGCGAGGCCAATCTGCAATCGCTTATCAATCTGCGGCTGGCGC GCGTGCAGCTGCAGCAGAAAAACGTGGATGGCGCATTGAAAACCCTCGACGGCGTGAAGGATCAGGGATGGACGGCGCTA GCGGAGGATACCCGTGGCGATGCGCAGGTGATCAAAGGCGATCAACAGGCCGCCCGTACCGCCTATGAAAAAGCGTTGCA GTCCGGCGCGCCGCAGGCGCTGGTGCGCATGAAACTGAATAATCTGTCCAGCTGA
Upstream 100 bases:
>100_bases GTAGTGGTGAAGGATTTGGCCACGGGTAACCAGGAAACGCTGGCGCAGAGCGATGTCGCCGCGCGGCTGGCATCGATTTT AGGTTAAGGAGAGGTACACC
Downstream 100 bases:
>100_bases GAGGGACCCCATGCAATTGCGTAAGACGATGTTTGTAGGACTGTTATCGGTCACCCTGCTCAGCGGGTGCTCGTGGTTCA GCGGCGAGGAAGACGTAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MEVYSTDNEQRDALRRFFVDNGKALAIGVVLGVGALVGWRYWHNHHNDAMMAASSAWQPVNAGLSGQAAQPQLDAAQHFA DANDNNYGALTSMGLARQFAERGDFPAAEKQLQKALGQTREANLQSLINLRLARVQLQQKNVDGALKTLDGVKDQGWTAL AEDTRGDAQVIKGDQQAARTAYEKALQSGAPQALVRMKLNNLSS
Sequences:
>Translated_204_residues MEVYSTDNEQRDALRRFFVDNGKALAIGVVLGVGALVGWRYWHNHHNDAMMAASSAWQPVNAGLSGQAAQPQLDAAQHFA DANDNNYGALTSMGLARQFAERGDFPAAEKQLQKALGQTREANLQSLINLRLARVQLQQKNVDGALKTLDGVKDQGWTAL AEDTRGDAQVIKGDQQAARTAYEKALQSGAPQALVRMKLNNLSS >Mature_204_residues MEVYSTDNEQRDALRRFFVDNGKALAIGVVLGVGALVGWRYWHNHHNDAMMAASSAWQPVNAGLSGQAAQPQLDAAQHFA DANDNNYGALTSMGLARQFAERGDFPAAEKQLQKALGQTREANLQSLINLRLARVQLQQKNVDGALKTLDGVKDQGWTAL AEDTRGDAQVIKGDQQAARTAYEKALQSGAPQALVRMKLNNLSS
Specific function: Unknown
COG id: COG2976
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0070 family [H]
Homologues:
Organism=Escherichia coli, GI1788860, Length=207, Percent_Identity=49.7584541062802, Blast_Score=202, Evalue=1e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018704 - InterPro: IPR011990 [H]
Pfam domain/function: PF09976 DUF2133 [H]
EC number: NA
Molecular weight: Translated: 22159; Mature: 22159
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVYSTDNEQRDALRRFFVDNGKALAIGVVLGVGALVGWRYWHNHHNDAMMAASSAWQPV CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC NAGLSGQAAQPQLDAAQHFADANDNNYGALTSMGLARQFAERGDFPAAEKQLQKALGQTR CCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHH EANLQSLINLRLARVQLQQKNVDGALKTLDGVKDQGWTALAEDTRGDAQVIKGDQQAART HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEHHHCCCCCHHHHCCHHHHHHH AYEKALQSGAPQALVRMKLNNLSS HHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure MEVYSTDNEQRDALRRFFVDNGKALAIGVVLGVGALVGWRYWHNHHNDAMMAASSAWQPV CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC NAGLSGQAAQPQLDAAQHFADANDNNYGALTSMGLARQFAERGDFPAAEKQLQKALGQTR CCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHH EANLQSLINLRLARVQLQQKNVDGALKTLDGVKDQGWTALAEDTRGDAQVIKGDQQAART HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEHHHCCCCCHHHHCCHHHHHHH AYEKALQSGAPQALVRMKLNNLSS HHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503; 9205837 [H]