Definition Sodalis glossinidius str. 'morsitans', complete genome.
Accession NC_007712
Length 4,171,146

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The map label for this gene is yeeD [H]

Identifier: 85059720

GI number: 85059720

Start: 2971878

End: 2972102

Strand: Reverse

Name: yeeD [H]

Synonym: SG1742

Alternate gene names: 85059720

Gene position: 2972102-2971878 (Counterclockwise)

Preceding gene: 85059721

Following gene: 85059718

Centisome position: 71.25

GC content: 52.89

Gene sequence:

>225_bases
ATGATTAAGAAACTTGATGTCATCAGCCAGGTCTGCCCTTTCCCGCTTATCGAAGCGCAGTCCGCTATGGCGGCATTGCA
AGTCGGTGATGAACTGGTTATTGACTTCGACTGTACACAGGCGACGGAAAGTTTGCCGCAATGGGCGGCGGAGCAGGGAC
ATGTCGTGACCGATTATCAGCAAGTGGGCTCAGCCCAGTGGAGCATCACGCTGAAAAAAGCTTAG

Upstream 100 bases:

>100_bases
CGGTGTATGGACAGCGTCATGGTATCTGTTCGTCCACCTGCGGCGTCAAGAAACGGTACGCGCCGCATCAATCTGATGAT
TACCTCAATAAGGAAACAAA

Downstream 100 bases:

>100_bases
GATGGCGTTGCGGACGCCGCATCAAGGGTGTCCGGAAGCGGTCTGCCGCCGCGAGGATGCCGAAGGGGGGCGGTGATGCA
TCAGATAGTATTCACCGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MIKKLDVISQVCPFPLIEAQSAMAALQVGDELVIDFDCTQATESLPQWAAEQGHVVTDYQQVGSAQWSITLKKA

Sequences:

>Translated_74_residues
MIKKLDVISQVCPFPLIEAQSAMAALQVGDELVIDFDCTQATESLPQWAAEQGHVVTDYQQVGSAQWSITLKKA
>Mature_74_residues
MIKKLDVISQVCPFPLIEAQSAMAALQVGDELVIDFDCTQATESLPQWAAEQGHVVTDYQQVGSAQWSITLKKA

Specific function: Unknown

COG id: COG0425

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0033 family [H]

Homologues:

Organism=Escherichia coli, GI1788322, Length=74, Percent_Identity=71.6216216216216, Blast_Score=121, Evalue=8e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001455 [H]

Pfam domain/function: PF01206 SirA [H]

EC number: NA

Molecular weight: Translated: 8092; Mature: 8092

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKLDVISQVCPFPLIEAQSAMAALQVGDELVIDFDCTQATESLPQWAAEQGHVVTDYQ
CCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCEEECHH
QVGSAQWSITLKKA
HHCCCEEEEEEECC
>Mature Secondary Structure
MIKKLDVISQVCPFPLIEAQSAMAALQVGDELVIDFDCTQATESLPQWAAEQGHVVTDYQ
CCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCEEECHH
QVGSAQWSITLKKA
HHCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]