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The map label for this gene is yenR [H]

Identifier: 85059718

GI number: 85059718

Start: 2970374

End: 2971096

Strand: Reverse

Name: yenR [H]

Synonym: SG1740

Alternate gene names: 85059718

Gene position: 2971096-2970374 (Counterclockwise)

Preceding gene: 85059720

Following gene: 85059717

Centisome position: 71.23

GC content: 39.97

Gene sequence:

>723_bases
ATGGGTGACCCAAGCGATAAGGATTATATGCTATTCATCAACCAGATGAAGAAAAATATTAAACTTTATCTTTCACATAT
ATTTAACGATTCCGATCTTTTTACTTTTGCCTACTTCATGATGAATAAGGATGATGGACAACCTGCCTTTATGATATCTG
ATTACCCGGCGGGTTGGCTAAATCAATATCGTAATTATGGTTATCAAAAAATTGACCCGGTAATGCTGATCGCCTGCCGT
AAGTTTACGCCTTTTAGCTGGAAAAATAATCCCAATATGCCAGATCAAAACTTTTATAAGATGTCGAGTGATTACGCACT
TGATAATGGTTATACCTTCACGCTACATGATCCCGACAACAACCTGGCCACGCTAACGATAAGCCAGATGAAGCAAAATG
CTGTATTCTATGATATAATAGAAAAAGAGAAAGATAAGTTTCAGATGTTGCTCATCACCACCCATGAAAAGGTTATCCGC
TTTTTCGACGCACGTAAGGAGCAAGGGAGTGAGTCAGAAGAGGAACCCTGCCGGCTTTCGCCGCGGGAAAAAGAGGTGCT
GTTCTGGGCAAGCGTGGGTAAAACATATAATGAAATCTCGACTATCCTGTCAATTCGCGAAGGAACAGTTAAATTCCATA
TTCGCAATATTATCAATAAACTTGGTGTGGCTAATGCGAAACATGCTATCACCCGGGCAATGGAACTTAAATTGTTAAGC
TAG

Upstream 100 bases:

>100_bases
ATACTATCCAATAATCATAAAGTAAAATAACTGCAGCGCCGGATTTCCATCACCGGTGCGATTATTCCGTTCATTCAAAT
AAATATAACAGGTAGAGATA

Downstream 100 bases:

>100_bases
CCGGGGAGAAATTTCCATCTCGATCCCTCGGCACCCTGTTAATTAATCAATTGTATTTATTTAATATGTGAAAAATACGT
TGCTGAGAAGGATGCCTATT

Product: transcriptional activator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MGDPSDKDYMLFINQMKKNIKLYLSHIFNDSDLFTFAYFMMNKDDGQPAFMISDYPAGWLNQYRNYGYQKIDPVMLIACR
KFTPFSWKNNPNMPDQNFYKMSSDYALDNGYTFTLHDPDNNLATLTISQMKQNAVFYDIIEKEKDKFQMLLITTHEKVIR
FFDARKEQGSESEEEPCRLSPREKEVLFWASVGKTYNEISTILSIREGTVKFHIRNIINKLGVANAKHAITRAMELKLLS

Sequences:

>Translated_240_residues
MGDPSDKDYMLFINQMKKNIKLYLSHIFNDSDLFTFAYFMMNKDDGQPAFMISDYPAGWLNQYRNYGYQKIDPVMLIACR
KFTPFSWKNNPNMPDQNFYKMSSDYALDNGYTFTLHDPDNNLATLTISQMKQNAVFYDIIEKEKDKFQMLLITTHEKVIR
FFDARKEQGSESEEEPCRLSPREKEVLFWASVGKTYNEISTILSIREGTVKFHIRNIINKLGVANAKHAITRAMELKLLS
>Mature_239_residues
GDPSDKDYMLFINQMKKNIKLYLSHIFNDSDLFTFAYFMMNKDDGQPAFMISDYPAGWLNQYRNYGYQKIDPVMLIACRK
FTPFSWKNNPNMPDQNFYKMSSDYALDNGYTFTLHDPDNNLATLTISQMKQNAVFYDIIEKEKDKFQMLLITTHEKVIRF
FDARKEQGSESEEEPCRLSPREKEVLFWASVGKTYNEISTILSIREGTVKFHIRNIINKLGVANAKHAITRAMELKLLS

Specific function: Probable transcriptional activator. Binds to autoinducer molecules OHHL and HHL [H]

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788224, Length=189, Percent_Identity=28.042328042328, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR005143
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03472 Autoind_bind; PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 28105; Mature: 27973

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDPSDKDYMLFINQMKKNIKLYLSHIFNDSDLFTFAYFMMNKDDGQPAFMISDYPAGWL
CCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCHHEEEEEEEECCCCCEEEEEECCCCHHH
NQYRNYGYQKIDPVMLIACRKFTPFSWKNNPNMPDQNFYKMSSDYALDNGYTFTLHDPDN
HHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHEECCCCEEECCCEEEEEECCCC
NLATLTISQMKQNAVFYDIIEKEKDKFQMLLITTHEKVIRFFDARKEQGSESEEEPCRLS
CEEEEEHHHHHCCCHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCC
PREKEVLFWASVGKTYNEISTILSIREGTVKFHIRNIINKLGVANAKHAITRAMELKLLS
CCCCEEEEEEHHCCHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCHHHHHHHHHHEEECC
>Mature Secondary Structure 
GDPSDKDYMLFINQMKKNIKLYLSHIFNDSDLFTFAYFMMNKDDGQPAFMISDYPAGWL
CCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCHHEEEEEEEECCCCCEEEEEECCCCHHH
NQYRNYGYQKIDPVMLIACRKFTPFSWKNNPNMPDQNFYKMSSDYALDNGYTFTLHDPDN
HHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHEECCCCEEECCCEEEEEECCCC
NLATLTISQMKQNAVFYDIIEKEKDKFQMLLITTHEKVIRFFDARKEQGSESEEEPCRLS
CEEEEEHHHHHCCCHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCC
PREKEVLFWASVGKTYNEISTILSIREGTVKFHIRNIINKLGVANAKHAITRAMELKLLS
CCCCEEEEEEHHCCHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7494483 [H]