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The map label for this gene is ypfJ [H]

Identifier: 85059701

GI number: 85059701

Start: 2938147

End: 2938674

Strand: Reverse

Name: ypfJ [H]

Synonym: SG1723

Alternate gene names: 85059701

Gene position: 2938674-2938147 (Counterclockwise)

Preceding gene: 85059702

Following gene: 85059700

Centisome position: 70.45

GC content: 56.63

Gene sequence:

>528_bases
ATGCGTTGGCAAGGCGGTCGCGAAAGTAATAATGTGGAAGACAGGCACGGACAGTCATCCGGTCTGGGGGGCGGTGGTTT
CCGGCTGCCGATTCGCGGTAAAGGCGGCATCGTGCTGCTCATCGTGGTGGTGGTAGCGGGCTATTATGGCATCGATCTCA
CGCCGCTGCTTACTGGCGGCCAGTCGGGTTCGCAGGTGAGCCAGCAAACCCGCATCAGTCCCAACGACGACGAGGTGACC
AAGTTTACCGCGGTTATCCAAAGATACCTGGCAGCAGATTTTCCAGCAGATGGGCAAAACCTATCAGCCGCCAAAGCTGG
TCATGTATCGCGGTGCGACGCATACCGGTTGCGGTACCGGTCAATCGGTCATGGGGCCGTTATATTGCCCGGCGGACAGT
ACGGTCTATATCGATCTCTCTTTTTACGACGACATGAAAAATCAGCTTGGTGCCGGCGGCAATTTCGCCCAGGGCTATGT
GGTCGCTCACGAGGTCAGTCATCACGTGCAAAAACTGCTTGGGATTGA

Upstream 100 bases:

>100_bases
CTAACTGCGCAATCGTTTACCTGGGCGGCAGTACCGCTGCCTGTCCAGGGTTATATGTTATCCTCATCATTAAATGATTA
ACGTTTAACTGGGGATGACG

Downstream 100 bases:

>100_bases
AAGCCTAGTTCGCCAGCAGCAGGGCGCGCCGGAAAAAACGGTTAGCGCACTGTTGGTAAAGCTGGAATTGCAGGCGGACT
GTTTCGCCGGCGTGTGGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MRWQGGRESNNVEDRHGQSSGLGGGGFRLPIRGKGGIVLLIVVVVAGYYGIDLTPLLTGGQSGSQVSQQTRISPNDDEVT
KFTAVIQRYLAADFPADGQNLSAAKAGHVSRCDAYRLRYRSIGHGAVILPGGQYGLYRSLFLRRHEKSAWCRRQFRPGLC
GRSRGQSSRAKTAWD

Sequences:

>Translated_175_residues
MRWQGGRESNNVEDRHGQSSGLGGGGFRLPIRGKGGIVLLIVVVVAGYYGIDLTPLLTGGQSGSQVSQQTRISPNDDEVT
KFTAVIQRYLAADFPADGQNLSAAKAGHVSRCDAYRLRYRSIGHGAVILPGGQYGLYRSLFLRRHEKSAWCRRQFRPGLC
GRSRGQSSRAKTAWD
>Mature_175_residues
MRWQGGRESNNVEDRHGQSSGLGGGGFRLPIRGKGGIVLLIVVVVAGYYGIDLTPLLTGGQSGSQVSQQTRISPNDDEVT
KFTAVIQRYLAADFPADGQNLSAAKAGHVSRCDAYRLRYRSIGHGAVILPGGQYGLYRSLFLRRHEKSAWCRRQFRPGLC
GRSRGQSSRAKTAWD

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=88, Percent_Identity=63.6363636363636, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 19108; Mature: 19108

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWQGGRESNNVEDRHGQSSGLGGGGFRLPIRGKGGIVLLIVVVVAGYYGIDLTPLLTGG
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECC
QSGSQVSQQTRISPNDDEVTKFTAVIQRYLAADFPADGQNLSAAKAGHVSRCDAYRLRYR
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHH
SIGHGAVILPGGQYGLYRSLFLRRHEKSAWCRRQFRPGLCGRSRGQSSRAKTAWD
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRWQGGRESNNVEDRHGQSSGLGGGGFRLPIRGKGGIVLLIVVVVAGYYGIDLTPLLTGG
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECC
QSGSQVSQQTRISPNDDEVTKFTAVIQRYLAADFPADGQNLSAAKAGHVSRCDAYRLRYR
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHH
SIGHGAVILPGGQYGLYRSLFLRRHEKSAWCRRQFRPGLCGRSRGQSSRAKTAWD
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]