| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059694
Identifier: 85059694
GI number: 85059694
Start: 2927427
End: 2927972
Strand: Reverse
Name: 85059694
Synonym: SG1716
Alternate gene names: NA
Gene position: 2927972-2927427 (Counterclockwise)
Preceding gene: 85059699
Following gene: 85059689
Centisome position: 70.2
GC content: 50.55
Gene sequence:
>546_bases TTGGCAACCGCCCATGGCAAAATGGTGGTTTTTAAGCGGCTGCTTCATTGCCAGGATGTCGACGTTAATATTGCCGATAT CGATGGCAATACCCCGCTGATGGAGTGTGTCAGACAGGGTAAATATCACCGCATGAGGCGACTCCTTCAGAACGGGCGGT TGAACCTTAACCTGCAAGACAAATGGTACAAAGCGGCGCTAATGCTGGCGATTGAATACCGCTGGCCTCAGATGTTTGAT GAATTACTTGCGTATAACGGGCTAAATACCAGTCTTGATGATTACTTAGGCAAAACGGTGCTGCATTTGGCGGTGGAATC GCGCAATTTAACCTACGTTCAGAAACTCATGGCAAAAAGCACTGACGAGATTAACGCGACGGATTATGACGGCAACACCC CGTTGCATAAAGCGACCTGTGCCGGTAAACAGGCCATCGCCGAGCAGTTGCTCACGGCAAAGGGTATCAACGTCACGCTC AAAAACCGCCACGGGGAAGATGCCCAATATTGCGCCGCTCCGCTGGAACATTTCGACACGAACTGA
Upstream 100 bases:
>100_bases TGCCCGCGATAGGTATCGCCCGCCAACGCCAGTAGGGGCACCTAACGTCACGGGAATCAATGTCAACCTTACCAATGCTT ATCATCAAAGCGCCCTGTGG
Downstream 100 bases:
>100_bases GTGATTATAGACTTTATGATCCTACATAATATCAGCTCCAACGATGACGAGATTGCCGACGACAAGATTGTCGTTGATTG ACGGGGGGCGCCTCTGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MATAHGKMVVFKRLLHCQDVDVNIADIDGNTPLMECVRQGKYHRMRRLLQNGRLNLNLQDKWYKAALMLAIEYRWPQMFD ELLAYNGLNTSLDDYLGKTVLHLAVESRNLTYVQKLMAKSTDEINATDYDGNTPLHKATCAGKQAIAEQLLTAKGINVTL KNRHGEDAQYCAAPLEHFDTN
Sequences:
>Translated_181_residues MATAHGKMVVFKRLLHCQDVDVNIADIDGNTPLMECVRQGKYHRMRRLLQNGRLNLNLQDKWYKAALMLAIEYRWPQMFD ELLAYNGLNTSLDDYLGKTVLHLAVESRNLTYVQKLMAKSTDEINATDYDGNTPLHKATCAGKQAIAEQLLTAKGINVTL KNRHGEDAQYCAAPLEHFDTN >Mature_180_residues ATAHGKMVVFKRLLHCQDVDVNIADIDGNTPLMECVRQGKYHRMRRLLQNGRLNLNLQDKWYKAALMLAIEYRWPQMFDE LLAYNGLNTSLDDYLGKTVLHLAVESRNLTYVQKLMAKSTDEINATDYDGNTPLHKATCAGKQAIAEQLLTAKGINVTLK NRHGEDAQYCAAPLEHFDTN
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 ANK repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002110 - InterPro: IPR020683 [H]
Pfam domain/function: PF00023 Ank [H]
EC number: NA
Molecular weight: Translated: 20538; Mature: 20407
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATAHGKMVVFKRLLHCQDVDVNIADIDGNTPLMECVRQGKYHRMRRLLQNGRLNLNLQD CCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHHCCCEEEEEHH KWYKAALMLAIEYRWPQMFDELLAYNGLNTSLDDYLGKTVLHLAVESRNLTYVQKLMAKS HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCC TDEINATDYDGNTPLHKATCAGKQAIAEQLLTAKGINVTLKNRHGEDAQYCAAPLEHFDT CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCC N C >Mature Secondary Structure ATAHGKMVVFKRLLHCQDVDVNIADIDGNTPLMECVRQGKYHRMRRLLQNGRLNLNLQD CCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHHCCCEEEEEHH KWYKAALMLAIEYRWPQMFDELLAYNGLNTSLDDYLGKTVLHLAVESRNLTYVQKLMAKS HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCC TDEINATDYDGNTPLHKATCAGKQAIAEQLLTAKGINVTLKNRHGEDAQYCAAPLEHFDT CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCC N C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA