| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059671
Identifier: 85059671
GI number: 85059671
Start: 2897575
End: 2898336
Strand: Reverse
Name: 85059671
Synonym: SG1693
Alternate gene names: NA
Gene position: 2898336-2897575 (Counterclockwise)
Preceding gene: 85059672
Following gene: 85059670
Centisome position: 69.49
GC content: 46.85
Gene sequence:
>762_bases ATGCGAGGTATTAACGTGATCTCTAATAATTTATCAGTTAATCATGGCTTTGTCACTGATAGAAGCATCGATAGCCAATC ATTGCTTGAGATGGTCAATTCGGCGCGGAAGGATTGTGCAGAAAGTATGGTGCATAACAATGTTTTTGTTGAGCGAATCA AAGACGAATTGGATGGCGAGACCTACAAAATTTTTGTAGGTCAAAAAAACGGCGCCACAATCGATATTGTTGAGATGAGT ATCAAGCAGGCGCTCCGCGTCGCTGCTCGTGAATCGAAAGCGGTACGCCGCGCTTTGGTCGATAAACTTGAAGCAATGCA GGAAGCATATATTCAAAAAAGGCGTTCAGGTAGCGGCCTGGTTGAATACCGTCTTGCCAAGGCAGATCAACTGCGAGCAC AAGCTCTCGAAAGGAACTTGGCATCTGCTCGTGAGTTGATGGCAATGTGTCCCAACCTTAGTGAATCAGCCAATCAGGTT ATTGTAGCGTCATTGGTTAATCCTTTGTTAGGACAGGCAGTAGTGCCGCTGCCCGTTCTTAAAGAGCACTATTACAGCGC CAGCGAAGTCGGCGAAATGCTCGATGTATCCGCCAACAAAATCGGCAGGATCGCTAATGCGCACAACCTGAAAACTGAGC AGTATGGGAAATTCTTTCTCGATAAATCCGCGCATTCCAGTAAGCAGGTCGAAGCGTTCCGCTACAACACAAATGGCGTT GCAGCTTTACGTCAGCTTCTTCACGGCACTGAGGTCGCTTAA
Upstream 100 bases:
>100_bases TTAAGCGAGAAAACAGAATGTGAAGCCGTACAGAGCGTTTTGTGGAAGAAGGACCGTTAACAATTTGCTAACGGTCAAGT CAATGCTAACTTAAATATTC
Downstream 100 bases:
>100_bases AGATCATGAGCGTGTTTGGGCTTGATTCGATGATTGGCGGGCGATATAGTCACCTTGCAGCGGCAAATTCCGTTGCCGGG TTTGAGACCCCGTATATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Regulatory Protein Rha Family; Xin-Antitoxin System Toxin Component Bro Family; Antirepressor; Phage Antirepressor
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MRGINVISNNLSVNHGFVTDRSIDSQSLLEMVNSARKDCAESMVHNNVFVERIKDELDGETYKIFVGQKNGATIDIVEMS IKQALRVAARESKAVRRALVDKLEAMQEAYIQKRRSGSGLVEYRLAKADQLRAQALERNLASARELMAMCPNLSESANQV IVASLVNPLLGQAVVPLPVLKEHYYSASEVGEMLDVSANKIGRIANAHNLKTEQYGKFFLDKSAHSSKQVEAFRYNTNGV AALRQLLHGTEVA
Sequences:
>Translated_253_residues MRGINVISNNLSVNHGFVTDRSIDSQSLLEMVNSARKDCAESMVHNNVFVERIKDELDGETYKIFVGQKNGATIDIVEMS IKQALRVAARESKAVRRALVDKLEAMQEAYIQKRRSGSGLVEYRLAKADQLRAQALERNLASARELMAMCPNLSESANQV IVASLVNPLLGQAVVPLPVLKEHYYSASEVGEMLDVSANKIGRIANAHNLKTEQYGKFFLDKSAHSSKQVEAFRYNTNGV AALRQLLHGTEVA >Mature_253_residues MRGINVISNNLSVNHGFVTDRSIDSQSLLEMVNSARKDCAESMVHNNVFVERIKDELDGETYKIFVGQKNGATIDIVEMS IKQALRVAARESKAVRRALVDKLEAMQEAYIQKRRSGSGLVEYRLAKADQLRAQALERNLASARELMAMCPNLSESANQV IVASLVNPLLGQAVVPLPVLKEHYYSASEVGEMLDVSANKIGRIANAHNLKTEQYGKFFLDKSAHSSKQVEAFRYNTNGV AALRQLLHGTEVA
Specific function: Unknown
COG id: COG3645
COG function: function code S; Uncharacterized phage-encoded protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27974; Mature: 27974
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGINVISNNLSVNHGFVTDRSIDSQSLLEMVNSARKDCAESMVHNNVFVERIKDELDGE CCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TYKIFVGQKNGATIDIVEMSIKQALRVAARESKAVRRALVDKLEAMQEAYIQKRRSGSGL EEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH VEYRLAKADQLRAQALERNLASARELMAMCPNLSESANQVIVASLVNPLLGQAVVPLPVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHH KEHYYSASEVGEMLDVSANKIGRIANAHNLKTEQYGKFFLDKSAHSSKQVEAFRYNTNGV HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHEEECCCHH AALRQLLHGTEVA HHHHHHHHCCCCC >Mature Secondary Structure MRGINVISNNLSVNHGFVTDRSIDSQSLLEMVNSARKDCAESMVHNNVFVERIKDELDGE CCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TYKIFVGQKNGATIDIVEMSIKQALRVAARESKAVRRALVDKLEAMQEAYIQKRRSGSGL EEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH VEYRLAKADQLRAQALERNLASARELMAMCPNLSESANQVIVASLVNPLLGQAVVPLPVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHH KEHYYSASEVGEMLDVSANKIGRIANAHNLKTEQYGKFFLDKSAHSSKQVEAFRYNTNGV HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHEEECCCHH AALRQLLHGTEVA HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA