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The map label for this gene is yfcD [C]

Identifier: 85059586

GI number: 85059586

Start: 2761955

End: 2762524

Strand: Reverse

Name: yfcD [C]

Synonym: SG1608

Alternate gene names: 85059586

Gene position: 2762524-2761955 (Counterclockwise)

Preceding gene: 85059589

Following gene: 85059583

Centisome position: 66.23

GC content: 60.18

Gene sequence:

>570_bases
ATGGAGAAACAGAGTCAGTCTGCCGGTGAGGAATGGGTCGACATTGTCAATGAAAACAATGAAGTCATCTCCCAGGCCAG
CCGCCAGCAGATGCGCGCGGAACGTCTGCGTCACCGCGCCAGCTATATTGTGGTGCATGATGGTGCGGGCAATATTCTGG
TTCAGCGTCGTACCGCCTGCAAAGACTTCTATCCGGGCTATCTGGATGCGACCGCCGGCGGCGTGGTACAAAGCGGCGAG
GGAATGCTCGATTCCGCCCGTCGCGAGGCGGAAGAAGAGCTGGGCATTGCGGATGTCCCCTTCGCTGAACACGGGCAATT
TTATTTCGAGAATGAGGCCTGCTGCGTGTGGGGCTCGCTGTTCAGCTGTGTCACCCATGGCCCGTTTGCGCTCCAGGAAA
GCGAGGTCGAGGCCGTCAACTGGCTGACGCCGGAGGAAATTACCGGCCGCTGCGACGAATTCACCCCGGACTCGCTGAAA
GCGCTGTCGCTGTGGCTGAGCCGCAATAACGCCCAAAGCTTTGGCAAGCCGCTGGCCTCGCAAACGTCGGACGATGGCGC
GGCCCAGTAG

Upstream 100 bases:

>100_bases
GCAATAACCTTCTAAGTTATGACAAAATACGTCAGTCGCGTTTCTTACGTTCAACCATACCGCGCGGGCAGTCCGCGCCA
TTGCATAAGGGTGTCATAGG

Downstream 100 bases:

>100_bases
CGGGCGCCAGCGTCGCGTGAGGCAGACCCTAGTCTATTTGCACGGGCAAGCCGGCGTAGGTATGAGGCCGGGCGCAGCAC
ATTTGCACGAGCTTTACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MEKQSQSAGEEWVDIVNENNEVISQASRQQMRAERLRHRASYIVVHDGAGNILVQRRTACKDFYPGYLDATAGGVVQSGE
GMLDSARREAEEELGIADVPFAEHGQFYFENEACCVWGSLFSCVTHGPFALQESEVEAVNWLTPEEITGRCDEFTPDSLK
ALSLWLSRNNAQSFGKPLASQTSDDGAAQ

Sequences:

>Translated_189_residues
MEKQSQSAGEEWVDIVNENNEVISQASRQQMRAERLRHRASYIVVHDGAGNILVQRRTACKDFYPGYLDATAGGVVQSGE
GMLDSARREAEEELGIADVPFAEHGQFYFENEACCVWGSLFSCVTHGPFALQESEVEAVNWLTPEEITGRCDEFTPDSLK
ALSLWLSRNNAQSFGKPLASQTSDDGAAQ
>Mature_189_residues
MEKQSQSAGEEWVDIVNENNEVISQASRQQMRAERLRHRASYIVVHDGAGNILVQRRTACKDFYPGYLDATAGGVVQSGE
GMLDSARREAEEELGIADVPFAEHGQFYFENEACCVWGSLFSCVTHGPFALQESEVEAVNWLTPEEITGRCDEFTPDSLK
ALSLWLSRNNAQSFGKPLASQTSDDGAAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1788637, Length=167, Percent_Identity=77.2455089820359, Blast_Score=254, Evalue=3e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.-.- [C]

Molecular weight: Translated: 20865; Mature: 20865

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKQSQSAGEEWVDIVNENNEVISQASRQQMRAERLRHRASYIVVHDGAGNILVQRRTAC
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECHHHH
KDFYPGYLDATAGGVVQSGEGMLDSARREAEEELGIADVPFAEHGQFYFENEACCVWGSL
HHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHH
FSCVTHGPFALQESEVEAVNWLTPEEITGRCDEFTPDSLKALSLWLSRNNAQSFGKPLAS
HHHHHCCCCCCCCCCHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCHHC
QTSDDGAAQ
CCCCCCCCC
>Mature Secondary Structure
MEKQSQSAGEEWVDIVNENNEVISQASRQQMRAERLRHRASYIVVHDGAGNILVQRRTAC
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECHHHH
KDFYPGYLDATAGGVVQSGEGMLDSARREAEEELGIADVPFAEHGQFYFENEACCVWGSL
HHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHH
FSCVTHGPFALQESEVEAVNWLTPEEITGRCDEFTPDSLKALSLWLSRNNAQSFGKPLAS
HHHHHCCCCCCCCCCHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCHHC
QTSDDGAAQ
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]