| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
Click here to switch to the map view.
The map label for this gene is 85059551
Identifier: 85059551
GI number: 85059551
Start: 2687994
End: 2688836
Strand: Reverse
Name: 85059551
Synonym: SG1573
Alternate gene names: NA
Gene position: 2688836-2687994 (Counterclockwise)
Preceding gene: 85059552
Following gene: 85059548
Centisome position: 64.46
GC content: 43.42
Gene sequence:
>843_bases TTGCCTCCTTCGGCGCAGGCCCCAATGCCGATCGAGTTTCATCTCCCGTTGCAGAGTACTGCGGATGTTAGTGTCCGGAC ACCGCTGCCCCGCGGTAATGTCCGGGCAAAACGGTCAGCTGAAGCAGGCTTGCATGAAAGAATGGATGATATGTTGATAT TTCAAACCGCAGAAAATTCTTATCCCACCACGGTCGATGCCCTTAGAGAGTTATATCAATCTATTACGGTTATCAAAAAC GAAAAAATGGCCAATGAAGTTTATGGCTTGTTATTTGTTGCCAAGAAAATTTTTCATCAGGCGGAATATTTACTTGCGGC GGCTAGGTTGGCGAAGGCGGATCTTGCTACTCATGAGGATTATATTAAGCAGAATAAATTTTCAGCCCGACATTTGCGGA AACTAAAAAACGTCTCAGAAGATTTACGTAATGATGTCGTCAAAGAGGCGTGGAATGTTTATCAGTTCTTTCGTATTTTT TCCACTATTGCCAAGTTTAAAAAGAGAATCGAAGCGATAATCAAAAAAATCAGTAAAACCTATGATCAAAAACACAGGGT GGCGGTGTCTGTTGTTGAGGAGGAATTAAGTAAGAATAGTCATGTTCTCGGCTTGACTGAACAGAAACTCAATAAAATTC GGATGATATTCAAGACGCCATCAGAGAGTATACTCAGTGAGATAAAGCACCTTATTATCAGGAAATCATCTCCCAAGGTC ATCCTGGTATTGTGGTGCTGGCTCTCGCGCATAAAAACGTTCCGCTGCCTTCCGTACCGGGGGGAAGAGACGGAAAACAC AGTTTTCCCTCCCTCATCGATAACGCTGACCAAGACTTTATGA
Upstream 100 bases:
>100_bases ACTTTCTCTGCTCTCGCTTATCAAGCCAGGCTACGGGATTGGCAGCCTGAATGCTGCGCCGGCAAATGTCGGCCATGTTG CAACCGCGCTGTCGGGTCAG
Downstream 100 bases:
>100_bases CTAAGGTTGTCGTACCTTACGAGGAGAAAGCGAAGAGCGCAGTGGAAAAAAGGGGCGGCGCCCCCTTAATGCAATTGGCG ACCAGCGGCAGCGCGGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MPPSAQAPMPIEFHLPLQSTADVSVRTPLPRGNVRAKRSAEAGLHERMDDMLIFQTAENSYPTTVDALRELYQSITVIKN EKMANEVYGLLFVAKKIFHQAEYLLAAARLAKADLATHEDYIKQNKFSARHLRKLKNVSEDLRNDVVKEAWNVYQFFRIF STIAKFKKRIEAIIKKISKTYDQKHRVAVSVVEEELSKNSHVLGLTEQKLNKIRMIFKTPSESILSEIKHLIIRKSSPKV ILVLWCWLSRIKTFRCLPYRGEETENTVFPPSSITLTKTL
Sequences:
>Translated_280_residues MPPSAQAPMPIEFHLPLQSTADVSVRTPLPRGNVRAKRSAEAGLHERMDDMLIFQTAENSYPTTVDALRELYQSITVIKN EKMANEVYGLLFVAKKIFHQAEYLLAAARLAKADLATHEDYIKQNKFSARHLRKLKNVSEDLRNDVVKEAWNVYQFFRIF STIAKFKKRIEAIIKKISKTYDQKHRVAVSVVEEELSKNSHVLGLTEQKLNKIRMIFKTPSESILSEIKHLIIRKSSPKV ILVLWCWLSRIKTFRCLPYRGEETENTVFPPSSITLTKTL >Mature_279_residues PPSAQAPMPIEFHLPLQSTADVSVRTPLPRGNVRAKRSAEAGLHERMDDMLIFQTAENSYPTTVDALRELYQSITVIKNE KMANEVYGLLFVAKKIFHQAEYLLAAARLAKADLATHEDYIKQNKFSARHLRKLKNVSEDLRNDVVKEAWNVYQFFRIFS TIAKFKKRIEAIIKKISKTYDQKHRVAVSVVEEELSKNSHVLGLTEQKLNKIRMIFKTPSESILSEIKHLIIRKSSPKVI LVLWCWLSRIKTFRCLPYRGEETENTVFPPSSITLTKTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32254; Mature: 32123
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPSAQAPMPIEFHLPLQSTADVSVRTPLPRGNVRAKRSAEAGLHERMDDMLIFQTAENS CCCCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCC YPTTVDALRELYQSITVIKNEKMANEVYGLLFVAKKIFHQAEYLLAAARLAKADLATHED CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YIKQNKFSARHLRKLKNVSEDLRNDVVKEAWNVYQFFRIFSTIAKFKKRIEAIIKKISKT HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YDQKHRVAVSVVEEELSKNSHVLGLTEQKLNKIRMIFKTPSESILSEIKHLIIRKSSPKV HHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCE ILVLWCWLSRIKTFRCLPYRGEETENTVFPPSSITLTKTL EHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEEECC >Mature Secondary Structure PPSAQAPMPIEFHLPLQSTADVSVRTPLPRGNVRAKRSAEAGLHERMDDMLIFQTAENS CCCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCC YPTTVDALRELYQSITVIKNEKMANEVYGLLFVAKKIFHQAEYLLAAARLAKADLATHED CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YIKQNKFSARHLRKLKNVSEDLRNDVVKEAWNVYQFFRIFSTIAKFKKRIEAIIKKISKT HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YDQKHRVAVSVVEEELSKNSHVLGLTEQKLNKIRMIFKTPSESILSEIKHLIIRKSSPKV HHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCE ILVLWCWLSRIKTFRCLPYRGEETENTVFPPSSITLTKTL EHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA