| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059531
Identifier: 85059531
GI number: 85059531
Start: 2652661
End: 2653407
Strand: Reverse
Name: 85059531
Synonym: SG1553
Alternate gene names: NA
Gene position: 2653407-2652661 (Counterclockwise)
Preceding gene: 85059532
Following gene: 85059528
Centisome position: 63.61
GC content: 53.95
Gene sequence:
>747_bases GTGGCAAACTGGGCGGATTCCTTCGCGTTGACCGACGGTTTTACCGTAGGCGAGCCGAAAATCATCAGCGATAATGCGGA TGATTTGCCGACCATTGACCGCGGTTTAAACGCACACGCCACTCGGGCTCATTTGCTCGGTGCCAGCTACTGCTACTCGG TACCTGAGTTGGAAAAAGTACGTGCGAATGGTCTCGAACTGCCCACCGACAAGGCCATCTATGTGCGTCAGGAGATGGAC AGGAAAATCGCCACTATCGGTGTCTACGGCGATGCTGATTATGCGATGCAGGGGCTGTTGACGTATCCGTTCACCACTAT TGAAGACAGTGTAGGGACGAAAACGGCGCTGGCGAAAATCACCAGCTTCATCAACCAGCATTGGAACCTGAAAGGTGGGG TGTTCCCGGTGACGCACATTGTGCTGCCGCAGGCGTTGTATGACGACATAAGCATCACACTAAGCAATCCTAATACCAAC CTGACCGTACTGGTGGCGCTCAAACAAGCGAATCCGGGTATCGAGTTTGTGAAGGCCAATGAACTCAACGCCGCGGGGAA AAGTGGCAAGGGCAGTATCGTTATCGGCACTATCCGCAACGATATCCTGTGTAACCGTGTTCCCGTGGCCTTTACAGCAC TCCCCGCTCAGGCTCGCAATATCAATGTCTACGTACCGTGCTACTGCAAGGTGGTGGAGCTGGAGGTGTTGCAGAAAGAC GCCCTCCTGCGCGTTGACCTGAAGTAG
Upstream 100 bases:
>100_bases GGAAGAGCTTGCGGCGTTGTTGTATGTCACACGTGAGCGGGTTATCGACTACACGCCGATGTTGACACCGTTGTAGAAAT TAATTCCCGTTAAAGCCGAG
Downstream 100 bases:
>100_bases TGCGGAGGTGGTGAAATGTTAACCATTGAGAAAGCCCAAACCCTGCTCTCGGTGTACGCCCCGGCGCTGGTAGCGGAAAT CACCGAAAAAAAGCTGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MANWADSFALTDGFTVGEPKIISDNADDLPTIDRGLNAHATRAHLLGASYCYSVPELEKVRANGLELPTDKAIYVRQEMD RKIATIGVYGDADYAMQGLLTYPFTTIEDSVGTKTALAKITSFINQHWNLKGGVFPVTHIVLPQALYDDISITLSNPNTN LTVLVALKQANPGIEFVKANELNAAGKSGKGSIVIGTIRNDILCNRVPVAFTALPAQARNINVYVPCYCKVVELEVLQKD ALLRVDLK
Sequences:
>Translated_248_residues MANWADSFALTDGFTVGEPKIISDNADDLPTIDRGLNAHATRAHLLGASYCYSVPELEKVRANGLELPTDKAIYVRQEMD RKIATIGVYGDADYAMQGLLTYPFTTIEDSVGTKTALAKITSFINQHWNLKGGVFPVTHIVLPQALYDDISITLSNPNTN LTVLVALKQANPGIEFVKANELNAAGKSGKGSIVIGTIRNDILCNRVPVAFTALPAQARNINVYVPCYCKVVELEVLQKD ALLRVDLK >Mature_247_residues ANWADSFALTDGFTVGEPKIISDNADDLPTIDRGLNAHATRAHLLGASYCYSVPELEKVRANGLELPTDKAIYVRQEMDR KIATIGVYGDADYAMQGLLTYPFTTIEDSVGTKTALAKITSFINQHWNLKGGVFPVTHIVLPQALYDDISITLSNPNTNL TVLVALKQANPGIEFVKANELNAAGKSGKGSIVIGTIRNDILCNRVPVAFTALPAQARNINVYVPCYCKVVELEVLQKDA LLRVDLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26977; Mature: 26846
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANWADSFALTDGFTVGEPKIISDNADDLPTIDRGLNAHATRAHLLGASYCYSVPELEKV CCCCCCCEEEECCEECCCCEEECCCCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCHHHH RANGLELPTDKAIYVRQEMDRKIATIGVYGDADYAMQGLLTYPFTTIEDSVGTKTALAKI HHCCCCCCCCCEEEEEHHHCCEEEEEEEECCHHHHHHHHEECCCEEECCCCCHHHHHHHH TSFINQHWNLKGGVFPVTHIVLPQALYDDISITLSNPNTNLTVLVALKQANPGIEFVKAN HHHHHHCCCCCCCCEEHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEECCCCCEEEEEEC ELNAAGKSGKGSIVIGTIRNDILCNRVPVAFTALPAQARNINVYVPCYCKVVELEVLQKD CCCCCCCCCCCCEEEEECCCCEEECCCCEEEEECCCCCCEEEEEECCEEEEEEEEECCCC ALLRVDLK CEEEEECC >Mature Secondary Structure ANWADSFALTDGFTVGEPKIISDNADDLPTIDRGLNAHATRAHLLGASYCYSVPELEKV CCCCCCEEEECCEECCCCEEECCCCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCHHHH RANGLELPTDKAIYVRQEMDRKIATIGVYGDADYAMQGLLTYPFTTIEDSVGTKTALAKI HHCCCCCCCCCEEEEEHHHCCEEEEEEEECCHHHHHHHHEECCCEEECCCCCHHHHHHHH TSFINQHWNLKGGVFPVTHIVLPQALYDDISITLSNPNTNLTVLVALKQANPGIEFVKAN HHHHHHCCCCCCCCEEHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEECCCCCEEEEEEC ELNAAGKSGKGSIVIGTIRNDILCNRVPVAFTALPAQARNINVYVPCYCKVVELEVLQKD CCCCCCCCCCCCEEEEECCCCEEECCCCEEEEECCCCCCEEEEEECCEEEEEEEEECCCC ALLRVDLK CEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA