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The map label for this gene is yddW [H]

Identifier: 85059498

GI number: 85059498

Start: 2562573

End: 2563958

Strand: Reverse

Name: yddW [H]

Synonym: SG1520

Alternate gene names: 85059498

Gene position: 2563958-2562573 (Counterclockwise)

Preceding gene: 85059500

Following gene: 85059493

Centisome position: 61.47

GC content: 58.44

Gene sequence:

>1386_bases
GTGCGGCGTTACAAAGGAATGGTTTTTTGGCTGGTGTTCTTCGTTTGGCTAGGGGGGCTTGCCGGCTGTGGGCAAAAACG
AGTGTCGGAGCGTCCATCGCCGCCACCCCGTCAATCCCAGGCGCCCGAGATGCGCGGCATTTGGTTGAGCACCGTTTACG
GACTCGACTGGCCCGCACCTTCGACGCTTGAGGCACAAAGCGACGCGCAACGGATCCAACAGCAACAAAGCGCGCTCGTC
GCAAAGCTGGACAACCTGGTAAGGATAGGTATTAATACGATGTTCTTTCAGGTCAAACCCGACGGCACCGCCCTTTATCG
TTCCGCCCTGTTACCGTGGTCGGAGGTCCTTACGGGGACGGTCGGTCGGGATCCGGGTTACGATCCTCTGGCGTTTATGC
TGTCCGAGGCCCACAAGAGAGGCTTGAAGGTCCATGCCTGGCTCAATCCCTATCGGGTCACGCTGAACATCCGACCCGAA
ACCGCCACAGCGCTGAGGGCCACGCTGCGAGCATCACCGGCCAGCGTTTATGCTCTACATCCCGACTGGATCCGCATTGC
CAGCGGCCGTTACGTCCTCGATCCCGGTTTGCCCGATGTGCGCCAATGGATCGTCAGCGTGGTGACCGAGCTGGTCAAAA
ATTACCCGGTCGATGGTATTCAGTTCGACGATTATTTCTATTATGAAACCCCGGGTTCCAGGCTGGATGACGATGCCACT
TACTGCCTGTACGGTCAGGGGTTTTCCAACAAAGCCGATTGGCGGCGCAACAATACCTTACTGATGGTCCAGCAAGTGTC
CCAGGCGATAAAATCTCTTAACGCGCAGGTTGCTTTTGGCATCAGCCCCTCCGGCGTTTGGCGCAACGCGGCGGATGATC
AGCGCGGTTCGGCTACCCAGGGCGGGGGGCCTGCGTATGATACCGCTTACGCCGACACCCGGCTGTGGGTTGAAAGAGGT
CTGCTGGACTATATTGCCCCGCAGCTGTACTGGCCGGTGGGGCGCCAGATCGTGCGCTATGATGTGCTAGCCAAATGGTG
GGCGGAGGTGGTTCGCCATACCCACACCCGGCTCTATATTGGCGTAGCGCTATATAAAATAGGCAGTCCGACCAAAGCGG
AACCGGATTGGGGCGTGGCGGAGGGGATCGCGGAGTTGAGAAGGCAGTTGGATATTAACGAGGCCCTACCTGAGATCAAC
GGCACCATTTTGTTCAGTGAGTCCTATCTCAGCCAGCCACAGACCGCAGCGGCGGTGAACTATCTGCAATGCTGCTGGGC
CGTTGGATCGAGGCAACTAAAACGGACATGCCCCATCCTTAGCGGCGGGGCGTCCGGTGGGGGTTATATGCCGCACAGCG
CAGACGGTAATTGCGGAAACCGTTGA

Upstream 100 bases:

>100_bases
ACAGGCAAGTCGGTAGAGTTGTTCGCAGTCGGTTTTAACAGCGTCCGGACTGTGTCGCGATTCATTTACTTATTTCAGGC
TCTACTTCAGGGAGACAACA

Downstream 100 bases:

>100_bases
TGAAAAAGACTGCGGCAAACATCAGGGTGAATAACAATACGATCGTCGCCCCCGGCGAGCTGTCCAGGAAGAAGGAAACG
TACACGCCCAAGAAGCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MRRYKGMVFWLVFFVWLGGLAGCGQKRVSERPSPPPRQSQAPEMRGIWLSTVYGLDWPAPSTLEAQSDAQRIQQQQSALV
AKLDNLVRIGINTMFFQVKPDGTALYRSALLPWSEVLTGTVGRDPGYDPLAFMLSEAHKRGLKVHAWLNPYRVTLNIRPE
TATALRATLRASPASVYALHPDWIRIASGRYVLDPGLPDVRQWIVSVVTELVKNYPVDGIQFDDYFYYETPGSRLDDDAT
YCLYGQGFSNKADWRRNNTLLMVQQVSQAIKSLNAQVAFGISPSGVWRNAADDQRGSATQGGGPAYDTAYADTRLWVERG
LLDYIAPQLYWPVGRQIVRYDVLAKWWAEVVRHTHTRLYIGVALYKIGSPTKAEPDWGVAEGIAELRRQLDINEALPEIN
GTILFSESYLSQPQTAAAVNYLQCCWAVGSRQLKRTCPILSGGASGGGYMPHSADGNCGNR

Sequences:

>Translated_461_residues
MRRYKGMVFWLVFFVWLGGLAGCGQKRVSERPSPPPRQSQAPEMRGIWLSTVYGLDWPAPSTLEAQSDAQRIQQQQSALV
AKLDNLVRIGINTMFFQVKPDGTALYRSALLPWSEVLTGTVGRDPGYDPLAFMLSEAHKRGLKVHAWLNPYRVTLNIRPE
TATALRATLRASPASVYALHPDWIRIASGRYVLDPGLPDVRQWIVSVVTELVKNYPVDGIQFDDYFYYETPGSRLDDDAT
YCLYGQGFSNKADWRRNNTLLMVQQVSQAIKSLNAQVAFGISPSGVWRNAADDQRGSATQGGGPAYDTAYADTRLWVERG
LLDYIAPQLYWPVGRQIVRYDVLAKWWAEVVRHTHTRLYIGVALYKIGSPTKAEPDWGVAEGIAELRRQLDINEALPEIN
GTILFSESYLSQPQTAAAVNYLQCCWAVGSRQLKRTCPILSGGASGGGYMPHSADGNCGNR
>Mature_461_residues
MRRYKGMVFWLVFFVWLGGLAGCGQKRVSERPSPPPRQSQAPEMRGIWLSTVYGLDWPAPSTLEAQSDAQRIQQQQSALV
AKLDNLVRIGINTMFFQVKPDGTALYRSALLPWSEVLTGTVGRDPGYDPLAFMLSEAHKRGLKVHAWLNPYRVTLNIRPE
TATALRATLRASPASVYALHPDWIRIASGRYVLDPGLPDVRQWIVSVVTELVKNYPVDGIQFDDYFYYETPGSRLDDDAT
YCLYGQGFSNKADWRRNNTLLMVQQVSQAIKSLNAQVAFGISPSGVWRNAADDQRGSATQGGGPAYDTAYADTRLWVERG
LLDYIAPQLYWPVGRQIVRYDVLAKWWAEVVRHTHTRLYIGVALYKIGSPTKAEPDWGVAEGIAELRRQLDINEALPEIN
GTILFSESYLSQPQTAAAVNYLQCCWAVGSRQLKRTCPILSGGASGGGYMPHSADGNCGNR

Specific function: Unknown

COG id: COG1649

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0748 family [H]

Homologues:

Organism=Escherichia coli, GI1787767, Length=396, Percent_Identity=60.1010101010101, Blast_Score=511, Evalue=1e-146,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003790
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF02638 DUF187 [H]

EC number: NA

Molecular weight: Translated: 51382; Mature: 51382

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRYKGMVFWLVFFVWLGGLAGCGQKRVSERPSPPPRQSQAPEMRGIWLSTVYGLDWPAP
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHEECCCCCCC
STLEAQSDAQRIQQQQSALVAKLDNLVRIGINTMFFQVKPDGTALYRSALLPWSEVLTGT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCCHHHHHHCC
VGRDPGYDPLAFMLSEAHKRGLKVHAWLNPYRVTLNIRPETATALRATLRASPASVYALH
CCCCCCCCHHHHHHHHHHHCCCEEEEEECCEEEEEEECCCHHHHHHHHHHCCCCEEEEEC
PDWIRIASGRYVLDPGLPDVRQWIVSVVTELVKNYPVDGIQFDDYFYYETPGSRLDDDAT
CCEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEECCEEEEECCCCCCCCCCC
YCLYGQGFSNKADWRRNNTLLMVQQVSQAIKSLNAQVAFGISPSGVWRNAADDQRGSATQ
EEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCC
GGGPAYDTAYADTRLWVERGLLDYIAPQLYWPVGRQIVRYDVLAKWWAEVVRHTHTRLYI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
GVALYKIGSPTKAEPDWGVAEGIAELRRQLDINEALPEINGTILFSESYLSQPQTAAAVN
EEEEEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCEEEEEHHHHCCCHHHHHHH
YLQCCWAVGSRQLKRTCPILSGGASGGGYMPHSADGNCGNR
HHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRYKGMVFWLVFFVWLGGLAGCGQKRVSERPSPPPRQSQAPEMRGIWLSTVYGLDWPAP
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHEECCCCCCC
STLEAQSDAQRIQQQQSALVAKLDNLVRIGINTMFFQVKPDGTALYRSALLPWSEVLTGT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCCHHHHHHCC
VGRDPGYDPLAFMLSEAHKRGLKVHAWLNPYRVTLNIRPETATALRATLRASPASVYALH
CCCCCCCCHHHHHHHHHHHCCCEEEEEECCEEEEEEECCCHHHHHHHHHHCCCCEEEEEC
PDWIRIASGRYVLDPGLPDVRQWIVSVVTELVKNYPVDGIQFDDYFYYETPGSRLDDDAT
CCEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEECCEEEEECCCCCCCCCCC
YCLYGQGFSNKADWRRNNTLLMVQQVSQAIKSLNAQVAFGISPSGVWRNAADDQRGSATQ
EEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCC
GGGPAYDTAYADTRLWVERGLLDYIAPQLYWPVGRQIVRYDVLAKWWAEVVRHTHTRLYI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
GVALYKIGSPTKAEPDWGVAEGIAELRRQLDINEALPEINGTILFSESYLSQPQTAAAVN
EEEEEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCEEEEEHHHHCCCHHHHHHH
YLQCCWAVGSRQLKRTCPILSGGASGGGYMPHSADGNCGNR
HHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]