| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is stfR [C]
Identifier: 85059486
GI number: 85059486
Start: 2534730
End: 2535245
Strand: Reverse
Name: stfR [C]
Synonym: SG1508
Alternate gene names: 85059486
Gene position: 2535245-2534730 (Counterclockwise)
Preceding gene: 85059493
Following gene: 85059480
Centisome position: 60.78
GC content: 54.46
Gene sequence:
>516_bases ATGATGGCCAAGAATGAATTTTTACCGTTTGCGACGGCAGACGGCGCTAACGTTTTGTCGGCGGAAGACTATCAGACGTT GCGCTCGCGCAGTAATGGCTTTAGCGCGGGTGTCGCCCGTTCGCAGGAGCTCAATACGGTCTGGCGGCAGGCATCGGTGA TTGCGCATGTGGTGGCGCAGTTTATTGCCGATACCAATAATAGTGATGTGGCTGACGACGGCGACCTGGATAAACTTCAG GCGGGGTTAATTCAAGCGCTCTCTAAGAATGTCAATAATACCGTGCCAGCCGCATCACTGAAGACTGCTGGCATTACCCA ACTCAGCAGCGCCACAGACAGCGAAAGTGAGACGCTGGCTGCGATGCCAAAAGCCGTGAAGGCGATAGTCGATAATCTCA GTGGTGGCCGCCTGCTGAATATCCAGTCCTTCACCCGCAGCGGTACCTATACTCCCACACCGGGAACTAGAAAGGTGAAG GTAATATTGACCGGAGGTGGAGCCTCAGGGGGGTAA
Upstream 100 bases:
>100_bases TGGCTCAGAGGGCGACAACGGCATTTTTGGTTTTGATATCCGTAATGGTTATGTGGATGGATTTGATACCGGCAGCTGGT CGGTAAAACTGTAAGGAATA
Downstream 100 bases:
>100_bases ATTCTTCATCCGAAAATTATGGAAGATCTGGTGGTGCAGGGGGGACAAGAATTGCTTTCATTGATCAACCCATCTATGGT ACTTACGTGACAATCGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MMAKNEFLPFATADGANVLSAEDYQTLRSRSNGFSAGVARSQELNTVWRQASVIAHVVAQFIADTNNSDVADDGDLDKLQ AGLIQALSKNVNNTVPAASLKTAGITQLSSATDSESETLAAMPKAVKAIVDNLSGGRLLNIQSFTRSGTYTPTPGTRKVK VILTGGGASGG
Sequences:
>Translated_171_residues MMAKNEFLPFATADGANVLSAEDYQTLRSRSNGFSAGVARSQELNTVWRQASVIAHVVAQFIADTNNSDVADDGDLDKLQ AGLIQALSKNVNNTVPAASLKTAGITQLSSATDSESETLAAMPKAVKAIVDNLSGGRLLNIQSFTRSGTYTPTPGTRKVK VILTGGGASGG >Mature_171_residues MMAKNEFLPFATADGANVLSAEDYQTLRSRSNGFSAGVARSQELNTVWRQASVIAHVVAQFIADTNNSDVADDGDLDKLQ AGLIQALSKNVNNTVPAASLKTAGITQLSSATDSESETLAAMPKAVKAIVDNLSGGRLLNIQSFTRSGTYTPTPGTRKVK VILTGGGASGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17744; Mature: 17744
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAKNEFLPFATADGANVLSAEDYQTLRSRSNGFSAGVARSQELNTVWRQASVIAHVVAQ CCCCCCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH FIADTNNSDVADDGDLDKLQAGLIQALSKNVNNTVPAASLKTAGITQLSSATDSESETLA HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHCCCCCCHHHHH AMPKAVKAIVDNLSGGRLLNIQSFTRSGTYTPTPGTRKVKVILTGGGASGG HHHHHHHHHHHCCCCCEEEEEHHHCCCCCCCCCCCCEEEEEEEECCCCCCC >Mature Secondary Structure MMAKNEFLPFATADGANVLSAEDYQTLRSRSNGFSAGVARSQELNTVWRQASVIAHVVAQ CCCCCCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH FIADTNNSDVADDGDLDKLQAGLIQALSKNVNNTVPAASLKTAGITQLSSATDSESETLA HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHCCCCCCHHHHH AMPKAVKAIVDNLSGGRLLNIQSFTRSGTYTPTPGTRKVKVILTGGGASGG HHHHHHHHHHHCCCCCEEEEEHHHCCCCCCCCCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA