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The map label for this gene is ydaL [H]

Identifier: 85059461

GI number: 85059461

Start: 2477367

End: 2477786

Strand: Reverse

Name: ydaL [H]

Synonym: SG1483

Alternate gene names: 85059461

Gene position: 2477786-2477367 (Counterclockwise)

Preceding gene: 85059465

Following gene: 85059459

Centisome position: 59.4

GC content: 54.52

Gene sequence:

>420_bases
ATGACATATGACGATAAAGCGTTATTTAACCAGGCCATGAAAGATGTCAGACCGTTGAAACAGCGCGCCAGCTTGGTGTT
TCTACCGGCAAAAACGGCCACGTCGCCCCGGTCGACGCCGGAGCGCCAGCCCGAGGAAAACTTTCTCACTACCGAGCTTT
TCGCGCCGCTACCCTGCGAAATGCCGCTTTATTTTAAGCAAGACGGTATCCAGCAGGGGCTTATCGATAAACTTGGCCGC
GGCAAATATGATATCGATGCCAGCCTCAACCTCAATATTAGCCGTATGCCGGTGGCGCGAGAAGAGTGCCGCACATTGCT
GATTATTCACGGCGGCAGCGGCGCCTGCTATGTGGCGTTGCGTAAGTCGGCACGGGCGAAAAGCGAAAATCGCGAGCGCC
ACGCAAAACGATTACGCTAA

Upstream 100 bases:

>100_bases
CGGATGCGGGGGCGAAAAGGCCGTGAAATATCGCGAAGTGGGGAGCAGTATTTACCCCCGGACCCTGCGTCGTCGTCCGG
GACGGAGTGAGTGAGATACG

Downstream 100 bases:

>100_bases
GCCCGTCTAAGCCCAATGCGGCTTTATGCATCCAACGGCTGCCTGTACCGGCGTGTGTGGCCGCCAGACGCTGACATTGG
CCGCAGGCGCGGTGATTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MTYDDKALFNQAMKDVRPLKQRASLVFLPAKTATSPRSTPERQPEENFLTTELFAPLPCEMPLYFKQDGIQQGLIDKLGR
GKYDIDASLNLNISRMPVAREECRTLLIIHGGSGACYVALRKSARAKSENRERHAKRLR

Sequences:

>Translated_139_residues
MTYDDKALFNQAMKDVRPLKQRASLVFLPAKTATSPRSTPERQPEENFLTTELFAPLPCEMPLYFKQDGIQQGLIDKLGR
GKYDIDASLNLNISRMPVAREECRTLLIIHGGSGACYVALRKSARAKSENRERHAKRLR
>Mature_138_residues
TYDDKALFNQAMKDVRPLKQRASLVFLPAKTATSPRSTPERQPEENFLTTELFAPLPCEMPLYFKQDGIQQGLIDKLGRG
KYDIDASLNLNISRMPVAREECRTLLIIHGGSGACYVALRKSARAKSENRERHAKRLR

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain [H]

Homologues:

Organism=Escherichia coli, GI1787602, Length=192, Percent_Identity=38.5416666666667, Blast_Score=108, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002625 [H]

Pfam domain/function: PF01713 Smr [H]

EC number: NA

Molecular weight: Translated: 15778; Mature: 15647

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYDDKALFNQAMKDVRPLKQRASLVFLPAKTATSPRSTPERQPEENFLTTELFAPLPCE
CCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC
MPLYFKQDGIQQGLIDKLGRGKYDIDASLNLNISRMPVAREECRTLLIIHGGSGACYVAL
CCCEECCCCHHHHHHHHHCCCCCCCCCEECCCEECCCCCHHCCCEEEEEECCCCEEEEEE
RKSARAKSENRERHAKRLR
HHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure 
TYDDKALFNQAMKDVRPLKQRASLVFLPAKTATSPRSTPERQPEENFLTTELFAPLPCE
CCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC
MPLYFKQDGIQQGLIDKLGRGKYDIDASLNLNISRMPVAREECRTLLIIHGGSGACYVAL
CCCEECCCCHHHHHHHHHCCCCCCCCCEECCCEECCCCCHHCCCEEEEEECCCCEEEEEE
RKSARAKSENRERHAKRLR
HHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]