| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is piv [H]
Identifier: 85059459
GI number: 85059459
Start: 2474633
End: 2475601
Strand: Reverse
Name: piv [H]
Synonym: SG1481
Alternate gene names: 85059459
Gene position: 2475601-2474633 (Counterclockwise)
Preceding gene: 85059461
Following gene: 85059458
Centisome position: 59.35
GC content: 51.6
Gene sequence:
>969_bases ATGAGTCTGCCAAATCCACTTTTTGTGGAAATTGATGTTTCTAAAGCGACACTGGACATTGCTGCCAGCAGTGATATTGC TCAGTTTACGGTCAGTAATAACTCTGACGGTTTTGATGCTATTACTGATGAACTGAGAAAGTATCCGGTGGTGTTGGTTC TGATAGAGGCCACTGGTGGACTTGAAGCTGCCGTGGCCTGCTTGTTTCAGGCTGAAGGCTTTGACGTCGCGGTGGTCAAT CCCAGACAGGCTCGTGACTTTGCCCGCACTATGGGCTATCTGGCAAAAACGGACCGTATTGATGCACGGGTGCTTGCACA AATGGCGGAGGTCATTAATCGACATCCAGGGCGGGAACGCTTTATCCGTGCCATGCTGGATGCGGAGCGTCAGGTTCTTG CTGCGATGGTAGTGCGCCGACGCCAGCTAACAGCGATGTTGATTGCTGAGCGTAACCGTCTTTATCCCGTTCATCCACAG AGCGGGAAAAGTATCAATATCATCATCAAAGCGCTGGAAGATGAGCTTGCCAGAATCGATGAAGACATGAACAACCACAT CAGGAACCACTTCAAAGAGCTGGCTGCCAGACTGAGCAGTATTAAAGGGGTTGGTACGATGACGGTTGCAGCGTTGCTGG CGGAGGTTTCCGACCTGGGTAGCCTCTCGAGACGAGCCATCAGCGCGCTTGTAGGCGTTGCTCCCATAAACCGGGACTTG GGTACCATGTGGGGCCGGCGAACCATCTTTGGCGGAAGGGGCGGAGTCCGAACAGCGCTTTATATGGCCGCACTTGTCGC AACCCGCTTTAATCCGGTGATAAAAGCATTTTATACGCGGCTGCTTGCAGCGGGAAAAGCCAAAAAAGTCGCGCTGGTTG CCTGTATGCGTAAACTTCTGACTATCCTGAACGCGATGCTCAGAAAGAACGAAGAGTGGGATGAATCGTACCATCACGTT TCTCTATAA
Upstream 100 bases:
>100_bases TATAGCCCGTAGAGAAGTTAATGACGCCTATACTGAGCCACTCATCTGAAACCTGAACAGTTGTCCGTACTCCATAACGT ATTTGCAAGGATGGGTAATA
Downstream 100 bases:
>100_bases TTTTATCGTTCAAGACAGTTGCTTTTTTAACTCAATTGAGTAATCGACATTTGGGCAAAAACGGTTGGTTTTATGCGTAT CTCTCCCGGACCCTTGGGCG
Product: transposase
Products: NA
Alternate protein names: PIVML [H]
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MSLPNPLFVEIDVSKATLDIAASSDIAQFTVSNNSDGFDAITDELRKYPVVLVLIEATGGLEAAVACLFQAEGFDVAVVN PRQARDFARTMGYLAKTDRIDARVLAQMAEVINRHPGRERFIRAMLDAERQVLAAMVVRRRQLTAMLIAERNRLYPVHPQ SGKSINIIIKALEDELARIDEDMNNHIRNHFKELAARLSSIKGVGTMTVAALLAEVSDLGSLSRRAISALVGVAPINRDL GTMWGRRTIFGGRGGVRTALYMAALVATRFNPVIKAFYTRLLAAGKAKKVALVACMRKLLTILNAMLRKNEEWDESYHHV SL
Sequences:
>Translated_322_residues MSLPNPLFVEIDVSKATLDIAASSDIAQFTVSNNSDGFDAITDELRKYPVVLVLIEATGGLEAAVACLFQAEGFDVAVVN PRQARDFARTMGYLAKTDRIDARVLAQMAEVINRHPGRERFIRAMLDAERQVLAAMVVRRRQLTAMLIAERNRLYPVHPQ SGKSINIIIKALEDELARIDEDMNNHIRNHFKELAARLSSIKGVGTMTVAALLAEVSDLGSLSRRAISALVGVAPINRDL GTMWGRRTIFGGRGGVRTALYMAALVATRFNPVIKAFYTRLLAAGKAKKVALVACMRKLLTILNAMLRKNEEWDESYHHV SL >Mature_321_residues SLPNPLFVEIDVSKATLDIAASSDIAQFTVSNNSDGFDAITDELRKYPVVLVLIEATGGLEAAVACLFQAEGFDVAVVNP RQARDFARTMGYLAKTDRIDARVLAQMAEVINRHPGRERFIRAMLDAERQVLAAMVVRRRQLTAMLIAERNRLYPVHPQS GKSINIIIKALEDELARIDEDMNNHIRNHFKELAARLSSIKGVGTMTVAALLAEVSDLGSLSRRAISALVGVAPINRDLG TMWGRRTIFGGRGGVRTALYMAALVATRFNPVIKAFYTRLLAAGKAKKVALVACMRKLLTILNAMLRKNEEWDESYHHVS L
Specific function: May be the site-specific invertase required for pilin gene inversion. Moraxella can express either a Q or I pilin; the inversion of 2 kb of DNA determines which pilin is expressed [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003346 - InterPro: IPR002525 [H]
Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]
EC number: NA
Molecular weight: Translated: 35542; Mature: 35411
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPNPLFVEIDVSKATLDIAASSDIAQFTVSNNSDGFDAITDELRKYPVVLVLIEATGG CCCCCCEEEEEECCHHEEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCEEEEEEECCCC LEAAVACLFQAEGFDVAVVNPRQARDFARTMGYLAKTDRIDARVLAQMAEVINRHPGRER HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHH FIRAMLDAERQVLAAMVVRRRQLTAMLIAERNRLYPVHPQSGKSINIIIKALEDELARID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHH EDMNNHIRNHFKELAARLSSIKGVGTMTVAALLAEVSDLGSLSRRAISALVGVAPINRDL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH GTMWGRRTIFGGRGGVRTALYMAALVATRFNPVIKAFYTRLLAAGKAKKVALVACMRKLL HHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH TILNAMLRKNEEWDESYHHVSL HHHHHHHHCCCCHHHCCCCCCC >Mature Secondary Structure SLPNPLFVEIDVSKATLDIAASSDIAQFTVSNNSDGFDAITDELRKYPVVLVLIEATGG CCCCCEEEEEECCHHEEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCEEEEEEECCCC LEAAVACLFQAEGFDVAVVNPRQARDFARTMGYLAKTDRIDARVLAQMAEVINRHPGRER HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHH FIRAMLDAERQVLAAMVVRRRQLTAMLIAERNRLYPVHPQSGKSINIIIKALEDELARID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHH EDMNNHIRNHFKELAARLSSIKGVGTMTVAALLAEVSDLGSLSRRAISALVGVAPINRDL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH GTMWGRRTIFGGRGGVRTALYMAALVATRFNPVIKAFYTRLLAAGKAKKVALVACMRKLL HHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH TILNAMLRKNEEWDESYHHVSL HHHHHHHHCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2403542 [H]