| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is aroH [H]
Identifier: 85059405
GI number: 85059405
Start: 2385807
End: 2386853
Strand: Reverse
Name: aroH [H]
Synonym: SG1427
Alternate gene names: 85059405
Gene position: 2386853-2385807 (Counterclockwise)
Preceding gene: 85059406
Following gene: 85059404
Centisome position: 57.22
GC content: 58.45
Gene sequence:
>1047_bases ATGCAAAAGACAGATGAATTGCGCACACGGCGCATCGACCGATTAGTTGCTCCCGCCTCGCTGGCCGCCGCCTTGCCGCT AAGCGCGGCGATGGCCGAGAATGTATTGCGAGTGCGCCAGCGTATTGAACGTATTTTACACGGCGATGATCCCCGTTTGC TGGTGATAATCGGCCCCTGCTCCATCCACGATACCGATGCGGCGCTGGATTATGCGCGCCGGCTTAATCCGCTGCGCGTC AAGTACCAAGACCGACTGGAAATCGTCATGCGTACCTATTTTGAAAAGCCGCGCACCGTGGTGGGTTGGAAAGGGTTGAT TGCCGATCCGGGGCTGGACGGCAGTTTTCGCGTGAATGACGGTTTGGAGATCGCCCGGCGGCTCTTGCTGGCGGTCAACG AATTAGGCCTACCGACCGCAACGGAATTCCTGGATATGGTCACCGGCCAATATATTGCAGATCTGATTAGCTGGGGCGCT ATCGGCGCGCGCACTACCGAAAGCCAGATCCATCGCGAGATGGCCTCCGCGCTGTCCTGCCCGGTCGGCTTCAAGAACGG CACGGACGGCAATATCCAAATCGCCATCGACGCCATTCGCGCCGCCCGCGCGTCCCATCTCTTTCTGTCCCCGGACAAAC AAGGTCAGATGACGATATATCAGACCGGCGGCAATCCGTATGGGCATATTATTATGCGCGGCGGCAAAGTGCCTAATTAT CAGCCGCCGGCGATCGCCGATGCCAGTGCGCAGTTGGCATCTTTCGGGCTGCCGGCGCATTTGCTGGTGGATTTCAGCCA CGGCAACAGCCAGAAGCAGTATCGCCGTCAATGGGACATCGCGCATTCTGTTGGCCAACAATTACGTGACGGCAGCCGGC AGGTGGTGGGGGTAATGGTTGAAAGTAATCTGGTGGCGGGTAATCAGACCCTGCGCGCCGACAAGCCGTTGACCTACGGT CAATCCATTACCGATGCCTGTCTTGGCTGGGAAGACAGCGAGCGTCTGCTAGCGCTGCTGAACGACGCAGTGGATTGCCG CTTCTAG
Upstream 100 bases:
>100_bases TTTGCCGGGCAAGGTTGAATTCAGCGCCGGTTGGGGTATCGTGAGCAGCATCGCTTCCCGGTAACTCCACCGCGGTGAGT CCACCATTTTAGAGATAAGC
Downstream 100 bases:
>100_bases TCGGCTATGCGGCCCGGCCGGGTAGGATATAGCCTGCCGGGCCGTGGCCTCATTGTTGCCGCGGCGGCGTCCGCCGTTTC ATGTCTGGCCTCTGGTTTAC
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MQKTDELRTRRIDRLVAPASLAAALPLSAAMAENVLRVRQRIERILHGDDPRLLVIIGPCSIHDTDAALDYARRLNPLRV KYQDRLEIVMRTYFEKPRTVVGWKGLIADPGLDGSFRVNDGLEIARRLLLAVNELGLPTATEFLDMVTGQYIADLISWGA IGARTTESQIHREMASALSCPVGFKNGTDGNIQIAIDAIRAARASHLFLSPDKQGQMTIYQTGGNPYGHIIMRGGKVPNY QPPAIADASAQLASFGLPAHLLVDFSHGNSQKQYRRQWDIAHSVGQQLRDGSRQVVGVMVESNLVAGNQTLRADKPLTYG QSITDACLGWEDSERLLALLNDAVDCRF
Sequences:
>Translated_348_residues MQKTDELRTRRIDRLVAPASLAAALPLSAAMAENVLRVRQRIERILHGDDPRLLVIIGPCSIHDTDAALDYARRLNPLRV KYQDRLEIVMRTYFEKPRTVVGWKGLIADPGLDGSFRVNDGLEIARRLLLAVNELGLPTATEFLDMVTGQYIADLISWGA IGARTTESQIHREMASALSCPVGFKNGTDGNIQIAIDAIRAARASHLFLSPDKQGQMTIYQTGGNPYGHIIMRGGKVPNY QPPAIADASAQLASFGLPAHLLVDFSHGNSQKQYRRQWDIAHSVGQQLRDGSRQVVGVMVESNLVAGNQTLRADKPLTYG QSITDACLGWEDSERLLALLNDAVDCRF >Mature_348_residues MQKTDELRTRRIDRLVAPASLAAALPLSAAMAENVLRVRQRIERILHGDDPRLLVIIGPCSIHDTDAALDYARRLNPLRV KYQDRLEIVMRTYFEKPRTVVGWKGLIADPGLDGSFRVNDGLEIARRLLLAVNELGLPTATEFLDMVTGQYIADLISWGA IGARTTESQIHREMASALSCPVGFKNGTDGNIQIAIDAIRAARASHLFLSPDKQGQMTIYQTGGNPYGHIIMRGGKVPNY QPPAIADASAQLASFGLPAHLLVDFSHGNSQKQYRRQWDIAHSVGQQLRDGSRQVVGVMVESNLVAGNQTLRADKPLTYG QSITDACLGWEDSERLLALLNDAVDCRF
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787996, Length=348, Percent_Identity=70.9770114942529, Blast_Score=517, Evalue=1e-148, Organism=Escherichia coli, GI1786969, Length=345, Percent_Identity=57.9710144927536, Blast_Score=420, Evalue=1e-119, Organism=Escherichia coli, GI1788953, Length=326, Percent_Identity=54.2944785276074, Blast_Score=363, Evalue=1e-101, Organism=Saccharomyces cerevisiae, GI6319726, Length=346, Percent_Identity=47.3988439306358, Blast_Score=320, Evalue=3e-88, Organism=Saccharomyces cerevisiae, GI6320240, Length=354, Percent_Identity=45.1977401129944, Blast_Score=312, Evalue=4e-86,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 38318; Mature: 38318
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKTDELRTRRIDRLVAPASLAAALPLSAAMAENVLRVRQRIERILHGDDPRLLVIIGPC CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC SIHDTDAALDYARRLNPLRVKYQDRLEIVMRTYFEKPRTVVGWKGLIADPGLDGSFRVND CCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCEEECCCCEEECCCCCCCEEECC GLEIARRLLLAVNELGLPTATEFLDMVTGQYIADLISWGAIGARTTESQIHREMASALSC CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC PVGFKNGTDGNIQIAIDAIRAARASHLFLSPDKQGQMTIYQTGGNPYGHIIMRGGKVPNY CCCCCCCCCCEEEEEEEHHHHHHHCEEEECCCCCCCEEEEECCCCCEEEEEEECCCCCCC QPPAIADASAQLASFGLPAHLLVDFSHGNSQKQYRRQWDIAHSVGQQLRDGSRQVVGVMV CCCCCCCCHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE ESNLVAGNQTLRADKPLTYGQSITDACLGWEDSERLLALLNDAVDCRF ECCEEECCCEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MQKTDELRTRRIDRLVAPASLAAALPLSAAMAENVLRVRQRIERILHGDDPRLLVIIGPC CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC SIHDTDAALDYARRLNPLRVKYQDRLEIVMRTYFEKPRTVVGWKGLIADPGLDGSFRVND CCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCEEECCCCEEECCCCCCCEEECC GLEIARRLLLAVNELGLPTATEFLDMVTGQYIADLISWGAIGARTTESQIHREMASALSC CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC PVGFKNGTDGNIQIAIDAIRAARASHLFLSPDKQGQMTIYQTGGNPYGHIIMRGGKVPNY CCCCCCCCCCEEEEEEEHHHHHHHCEEEECCCCCCCEEEEECCCCCEEEEEEECCCCCCC QPPAIADASAQLASFGLPAHLLVDFSHGNSQKQYRRQWDIAHSVGQQLRDGSRQVVGVMV CCCCCCCCHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE ESNLVAGNQTLRADKPLTYGQSITDACLGWEDSERLLALLNDAVDCRF ECCEEECCCEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]