| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059404
Identifier: 85059404
GI number: 85059404
Start: 2384965
End: 2385465
Strand: Reverse
Name: 85059404
Synonym: SG1426
Alternate gene names: NA
Gene position: 2385465-2384965 (Counterclockwise)
Preceding gene: 85059405
Following gene: 85059396
Centisome position: 57.19
GC content: 55.49
Gene sequence:
>501_bases ATGCAAACCAGCCTTTCCTATGGCGCTTCGCTGAACGCGCTGACAGTTCCCCTTCTAGCGCCGTTACCGCCTTCATCCAC GACGCTGGCGCAACGGCTGACGGCAGTGCAGACGCTACCGATGGTGCTTCCGCCCATGGTCTGCCACGGTATCATCCCGC CCGCTACCGGCAAACATCTTAAGACCGTTACACTCGGCATCAGCGGCATCCCGGGCAGCGATTTACACCATTTTCGGGTT GATATTGTCCAGCAAAGCTATCCGTCCGAGGATTGTATCAACCACTGCCTGTATCCGCTTAAGCAGCGTCGTTTGCTGAT GTATACCCAAATCGCCAGCGCCCGGGAAAGAGTCAATCTACTATGCCTGTATGCCAGTAATGACGGCGGGGGATCCCACG CGATGCTGTCGGCGAAAAAAATTACCCGCCACAAACTCATTCTACCTATCGGCTGGATTGTGCGCTTTCCTTCCGCGGTG ACGTCACTTTCTTTACCGTGA
Upstream 100 bases:
>100_bases AAGGGGTAAACACGCGTAGACTTTATGTCGTCCCATCAGCAGGCTTTACCACCGGCGCACCCGGGCAAACGTTTTCGCTT CTACTCCGCGAGGTTTATCC
Downstream 100 bases:
>100_bases TGTATAAAAACAGCGACGGCCTCCGCGAGCCACTATTCACCCTTACTCGCACTGCCGATAACACCCTCGTCGCCTATGCC CCGGCGCAACAATCCGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MQTSLSYGASLNALTVPLLAPLPPSSTTLAQRLTAVQTLPMVLPPMVCHGIIPPATGKHLKTVTLGISGIPGSDLHHFRV DIVQQSYPSEDCINHCLYPLKQRRLLMYTQIASARERVNLLCLYASNDGGGSHAMLSAKKITRHKLILPIGWIVRFPSAV TSLSLP
Sequences:
>Translated_166_residues MQTSLSYGASLNALTVPLLAPLPPSSTTLAQRLTAVQTLPMVLPPMVCHGIIPPATGKHLKTVTLGISGIPGSDLHHFRV DIVQQSYPSEDCINHCLYPLKQRRLLMYTQIASARERVNLLCLYASNDGGGSHAMLSAKKITRHKLILPIGWIVRFPSAV TSLSLP >Mature_166_residues MQTSLSYGASLNALTVPLLAPLPPSSTTLAQRLTAVQTLPMVLPPMVCHGIIPPATGKHLKTVTLGISGIPGSDLHHFRV DIVQQSYPSEDCINHCLYPLKQRRLLMYTQIASARERVNLLCLYASNDGGGSHAMLSAKKITRHKLILPIGWIVRFPSAV TSLSLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17985; Mature: 17985
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTSLSYGASLNALTVPLLAPLPPSSTTLAQRLTAVQTLPMVLPPMVCHGIIPPATGKHL CCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE KTVTLGISGIPGSDLHHFRVDIVQQSYPSEDCINHCLYPLKQRRLLMYTQIASARERVNL EEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE LCLYASNDGGGSHAMLSAKKITRHKLILPIGWIVRFPSAVTSLSLP EEEEECCCCCCCCEEHHHHHHHHHEEEEEHHHHHHCCHHHHHCCCC >Mature Secondary Structure MQTSLSYGASLNALTVPLLAPLPPSSTTLAQRLTAVQTLPMVLPPMVCHGIIPPATGKHL CCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE KTVTLGISGIPGSDLHHFRVDIVQQSYPSEDCINHCLYPLKQRRLLMYTQIASARERVNL EEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE LCLYASNDGGGSHAMLSAKKITRHKLILPIGWIVRFPSAVTSLSLP EEEEECCCCCCCCEEHHHHHHHHHEEEEEHHHHHHCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA