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The map label for this gene is cmoB

Identifier: 85059230

GI number: 85059230

Start: 2113972

End: 2114943

Strand: Reverse

Name: cmoB

Synonym: SG1252

Alternate gene names: 85059230

Gene position: 2114943-2113972 (Counterclockwise)

Preceding gene: 85059231

Following gene: 85059228

Centisome position: 50.7

GC content: 58.85

Gene sequence:

>972_bases
GTGAGTCAGTTTGCCGATTTTTATCAGCTTATCGCCAAGAGTCCTCTCAGCCATTGGCTTAATACCCTGCCTGCGCAGCT
TAGCGAGTGGGAGCAAACCTCCCAGCACTGCAAGTTCAGTCAATGGTTTAACGCGGTGGAACGGCTGCCAATGCTCACCC
CCGCACGCCTGGATCTGCTTCACGGCGTTGAGGCGGACTGCGATCCGCCTCTGTCCGCCGGCCAGCAGGCGGGGATCGAA
TCTCTGCTGCGCCAGCTCATGCCCTGGCGCAAAGGTCCGTTTTCCCTGTATGGCGTCAGTATTGATACCGAATGGCGCTC
TGACTGGAAATGGGAACGCGTGCTACCGCATATCGCGCCGCTGGCCGGTCGGCTTATTCTGGACGTCGGCTGCGGCAGCG
GCTATCACCTGTGGCGCATGGTGGGCGCCGGCGCTCAGTTAGCTGTCGGGATTGATCCCATGCAACTGTTCTATTGCCAG
TTCGCGGCGGTGCGTAAGCTGCTCGGCGGTGATCAACGGGCGCATCTGCTGCCGTTGGGCATCGAGCAGTTACCGGCGTT
GGCCGCCTTTGACACCGTTTTTTCCATGGGGGTACTTTACCACCGCCGATCGCCGCTTGACCATTTGCTGCAATTGAAAA
ATCAATTGGTCAGCGGCGGTGAATTAGTGCTGGAAACGTTGGTCATTGAAGGCGACAGCCAACAGGTCTTGGTGCCCGGT
GAGCGCTACGCCCAGATGCGCAATGTCTACTTTATTCCTTCCGCCACCGCGCTGGTAAGCTGGCTGGAAAAGTGCGGTTT
TGTCAACGTGCGTCATGTGGATATGTCGGTCACCAGCACCGACGAACAACGACGTACCGCGTGGATGACCAGCGAATCTC
TGGCGGATTTTCTCCATTCCGACGATCCGCGGCTAACCGTCGAGGGTCACCCCGCACCGCTGCGCGCGGTCATCGTGGCG
GAGAAACACTGA

Upstream 100 bases:

>100_bases
ATAAACAACGCCTGGTCGAGGCGGGCTTTGGTCATGCCGAGCTTTGGTTCCAGTGCTTCAATTTCGGTTCATTGATCTCC
ATTAAACCGGAGAGCGGGCA

Downstream 100 bases:

>100_bases
CTCCCTAGGGCGCGCACGATTAACATGGCGGTGAAGCGCTAATGTCTCAGTACGCGTCCCCCGGGGAGAGGCCTCGCGGT
TGCGTTATCGATGTTGCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MSQFADFYQLIAKSPLSHWLNTLPAQLSEWEQTSQHCKFSQWFNAVERLPMLTPARLDLLHGVEADCDPPLSAGQQAGIE
SLLRQLMPWRKGPFSLYGVSIDTEWRSDWKWERVLPHIAPLAGRLILDVGCGSGYHLWRMVGAGAQLAVGIDPMQLFYCQ
FAAVRKLLGGDQRAHLLPLGIEQLPALAAFDTVFSMGVLYHRRSPLDHLLQLKNQLVSGGELVLETLVIEGDSQQVLVPG
ERYAQMRNVYFIPSATALVSWLEKCGFVNVRHVDMSVTSTDEQRRTAWMTSESLADFLHSDDPRLTVEGHPAPLRAVIVA
EKH

Sequences:

>Translated_323_residues
MSQFADFYQLIAKSPLSHWLNTLPAQLSEWEQTSQHCKFSQWFNAVERLPMLTPARLDLLHGVEADCDPPLSAGQQAGIE
SLLRQLMPWRKGPFSLYGVSIDTEWRSDWKWERVLPHIAPLAGRLILDVGCGSGYHLWRMVGAGAQLAVGIDPMQLFYCQ
FAAVRKLLGGDQRAHLLPLGIEQLPALAAFDTVFSMGVLYHRRSPLDHLLQLKNQLVSGGELVLETLVIEGDSQQVLVPG
ERYAQMRNVYFIPSATALVSWLEKCGFVNVRHVDMSVTSTDEQRRTAWMTSESLADFLHSDDPRLTVEGHPAPLRAVIVA
EKH
>Mature_322_residues
SQFADFYQLIAKSPLSHWLNTLPAQLSEWEQTSQHCKFSQWFNAVERLPMLTPARLDLLHGVEADCDPPLSAGQQAGIES
LLRQLMPWRKGPFSLYGVSIDTEWRSDWKWERVLPHIAPLAGRLILDVGCGSGYHLWRMVGAGAQLAVGIDPMQLFYCQF
AAVRKLLGGDQRAHLLPLGIEQLPALAAFDTVFSMGVLYHRRSPLDHLLQLKNQLVSGGELVLETLVIEGDSQQVLVPGE
RYAQMRNVYFIPSATALVSWLEKCGFVNVRHVDMSVTSTDEQRRTAWMTSESLADFLHSDDPRLTVEGHPAPLRAVIVAE
KH

Specific function: Catalyzes the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at position 34 in tRNA

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoB family

Homologues:

Organism=Escherichia coli, GI1788178, Length=322, Percent_Identity=73.6024844720497, Blast_Score=497, Evalue=1e-142,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CMOB_SODGM (Q2NTJ8)

Other databases:

- EMBL:   AP008232
- RefSeq:   YP_454932.1
- ProteinModelPortal:   Q2NTJ8
- SMR:   Q2NTJ8
- STRING:   Q2NTJ8
- GeneID:   3867859
- GenomeReviews:   AP008232_GR
- KEGG:   sgl:SG1252
- NMPDR:   fig|343509.6.peg.2596
- eggNOG:   COG0500
- HOGENOM:   HBG296882
- OMA:   DVIFCLG
- PhylomeDB:   Q2NTJ8
- ProtClustDB:   PRK15068
- BioCyc:   SGLO343509:SG1252-MONOMER
- HAMAP:   MF_01590
- InterPro:   IPR010017
- TIGRFAMs:   TIGR00452

Pfam domain/function: PF08003 Methyltransf_9

EC number: NA

Molecular weight: Translated: 36247; Mature: 36116

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQFADFYQLIAKSPLSHWLNTLPAQLSEWEQTSQHCKFSQWFNAVERLPMLTPARLDLL
CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHH
HGVEADCDPPLSAGQQAGIESLLRQLMPWRKGPFSLYGVSIDTEWRSDWKWERVLPHIAP
HCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHH
LAGRLILDVGCGSGYHLWRMVGAGAQLAVGIDPMQLFYCQFAAVRKLLGGDQRAHLLPLG
HHCEEEEEECCCCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEECC
IEQLPALAAFDTVFSMGVLYHRRSPLDHLLQLKNQLVSGGELVLETLVIEGDSQQVLVPG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHEEHHHEEECCCCEEEECC
ERYAQMRNVYFIPSATALVSWLEKCGFVNVRHVDMSVTSTDEQRRTAWMTSESLADFLHS
HHHHHHCCEEECCCHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHC
DDPRLTVEGHPAPLRAVIVAEKH
CCCEEEECCCCCCEEEEEEECCC
>Mature Secondary Structure 
SQFADFYQLIAKSPLSHWLNTLPAQLSEWEQTSQHCKFSQWFNAVERLPMLTPARLDLL
CHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHH
HGVEADCDPPLSAGQQAGIESLLRQLMPWRKGPFSLYGVSIDTEWRSDWKWERVLPHIAP
HCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHH
LAGRLILDVGCGSGYHLWRMVGAGAQLAVGIDPMQLFYCQFAAVRKLLGGDQRAHLLPLG
HHCEEEEEECCCCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEECC
IEQLPALAAFDTVFSMGVLYHRRSPLDHLLQLKNQLVSGGELVLETLVIEGDSQQVLVPG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHEEHHHEEECCCCEEEECC
ERYAQMRNVYFIPSATALVSWLEKCGFVNVRHVDMSVTSTDEQRRTAWMTSESLADFLHS
HHHHHHCCEEECCCHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHC
DDPRLTVEGHPAPLRAVIVAEKH
CCCEEEECCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA