| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059151
Identifier: 85059151
GI number: 85059151
Start: 1974024
End: 1975040
Strand: Reverse
Name: 85059151
Synonym: SG1173
Alternate gene names: NA
Gene position: 1975040-1974024 (Counterclockwise)
Preceding gene: 85059152
Following gene: 85059146
Centisome position: 47.35
GC content: 41.1
Gene sequence:
>1017_bases ATGGTTGGCAAACGCAAGAATCCAGCAGATAACGCTCTGCCACCTCGTGTTTATCGAGGGAAAACACAATATGAATTTCA TCCGGCTAGCGGTGGGTCAATATCATTATGCCCTCTGGATTCATTAATACCTGTTGTATGGGCGAAATATGAACAAGCCA ACAATTATCGCAATGAAAGAAAAAACCTAGAGCATTTGATAAATCAGTTTTTTCTTTCTGCTGATTTTATGGCTCTTGCA GCGGAAACACAAAAAGACTATAAAAGAAATTCAACTAGACTACTTCCCGTTTTTGGGAAAATGCATCCTGATAATGTTAA GCCTCAGCATATAAGAAAATATATGGATAAACGGGGAACAAAAAGCAAAACACAGGCAAACCATGAAAAACGGTTTCTAT CACGTGTTTATCGCTGGGGTTATGAGAGAGGAATTACCAAGGGGAATCCATGCTCAGGTGTAAGACAATTTAAAGAAGAG GCTAGAGATCGCTACATTACAGATGCAGAATATGAAGCGTTGTATTCCGTTGCTCCCGCTACTGTTCGTATAGCAATGGA GATCGCTTATTTATGTTGCGCTCGGCAGAGCGATGTTTTGTCATTGACTAAATCACAGTTGCTTGATGATGGGATTTTCA TTTGCCAAGGGAAAACGGGCAAGAAACAGATAAAAGCATGGACTGAACGCTTAAAAAAAGTAATTGACTTAGCCGATAGC TTACCAGCATCACAAGGCGTTAACAGCATTTATGTATTACATCAACCCAACGGCAATCGTTACACACGTGATGGTTTTAA TTCAAGTTGGGCAAAAGCTCGAGCAAAAGCTTCGGTGTTACATCCTGAGCTAACATTTGATTTCACTTTTCACGATTTGA AAGCGAAGGGAATCTCTGATTTAGAAGGTTCACTGTCAGAGAAGCAAGCGATCTCCGGGCATAAAAGCATCGGACAGACG GCACGGTACAACAGAAAAACAGAGATAGTCCCCGTCGTCGGTGGTCAGAAAAAATGA
Upstream 100 bases:
>100_bases TACAACGTGGTATCACATTGCTCATCCGTTGGCATATAGGCAATTTTCAACGGAACAAAAGCTGGATGAACCTAACTTCA GTGCTATGTGAGTTATAATA
Downstream 100 bases:
>100_bases ATTTTTATTCAAGCCAAAAAAATGATGTTAGGAATGATGTTAGGAATAGCTGATTTGGGCACAAAAAAACCGCCTTGACG ACGGTGACTAATACAGGACA
Product: phage integrase
Products: NA
Alternate protein names: Integrase Family Protein; Phage Integrase Family Protein; Phage Integrase; Integrase; Site-Specific Recombinase Phage Integrase Family; Phage Integrase Family Site Specific Recombinase; Integrase/Recombinase; Integrase Protein; Site-Specific Recombinase; Integrase Partial Gene; Prophage; Integrase Prophage; Phage IntegrasePhage Integrase N-Terminal SAM-Like
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MVGKRKNPADNALPPRVYRGKTQYEFHPASGGSISLCPLDSLIPVVWAKYEQANNYRNERKNLEHLINQFFLSADFMALA AETQKDYKRNSTRLLPVFGKMHPDNVKPQHIRKYMDKRGTKSKTQANHEKRFLSRVYRWGYERGITKGNPCSGVRQFKEE ARDRYITDAEYEALYSVAPATVRIAMEIAYLCCARQSDVLSLTKSQLLDDGIFICQGKTGKKQIKAWTERLKKVIDLADS LPASQGVNSIYVLHQPNGNRYTRDGFNSSWAKARAKASVLHPELTFDFTFHDLKAKGISDLEGSLSEKQAISGHKSIGQT ARYNRKTEIVPVVGGQKK
Sequences:
>Translated_338_residues MVGKRKNPADNALPPRVYRGKTQYEFHPASGGSISLCPLDSLIPVVWAKYEQANNYRNERKNLEHLINQFFLSADFMALA AETQKDYKRNSTRLLPVFGKMHPDNVKPQHIRKYMDKRGTKSKTQANHEKRFLSRVYRWGYERGITKGNPCSGVRQFKEE ARDRYITDAEYEALYSVAPATVRIAMEIAYLCCARQSDVLSLTKSQLLDDGIFICQGKTGKKQIKAWTERLKKVIDLADS LPASQGVNSIYVLHQPNGNRYTRDGFNSSWAKARAKASVLHPELTFDFTFHDLKAKGISDLEGSLSEKQAISGHKSIGQT ARYNRKTEIVPVVGGQKK >Mature_338_residues MVGKRKNPADNALPPRVYRGKTQYEFHPASGGSISLCPLDSLIPVVWAKYEQANNYRNERKNLEHLINQFFLSADFMALA AETQKDYKRNSTRLLPVFGKMHPDNVKPQHIRKYMDKRGTKSKTQANHEKRFLSRVYRWGYERGITKGNPCSGVRQFKEE ARDRYITDAEYEALYSVAPATVRIAMEIAYLCCARQSDVLSLTKSQLLDDGIFICQGKTGKKQIKAWTERLKKVIDLADS LPASQGVNSIYVLHQPNGNRYTRDGFNSSWAKARAKASVLHPELTFDFTFHDLKAKGISDLEGSLSEKQAISGHKSIGQT ARYNRKTEIVPVVGGQKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38320; Mature: 38320
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGKRKNPADNALPPRVYRGKTQYEFHPASGGSISLCPLDSLIPVVWAKYEQANNYRNER CCCCCCCCCCCCCCCHHHCCCCCEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH KNLEHLINQFFLSADFMALAAETQKDYKRNSTRLLPVFGKMHPDNVKPQHIRKYMDKRGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCC KSKTQANHEKRFLSRVYRWGYERGITKGNPCSGVRQFKEEARDRYITDAEYEALYSVAPA CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCHH TVRIAMEIAYLCCARQSDVLSLTKSQLLDDGIFICQGKTGKKQIKAWTERLKKVIDLADS HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHC LPASQGVNSIYVLHQPNGNRYTRDGFNSSWAKARAKASVLHPELTFDFTFHDLKAKGISD CCHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEHHHHHCCCHH LEGSLSEKQAISGHKSIGQTARYNRKTEIVPVVGGQKK HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC >Mature Secondary Structure MVGKRKNPADNALPPRVYRGKTQYEFHPASGGSISLCPLDSLIPVVWAKYEQANNYRNER CCCCCCCCCCCCCCCHHHCCCCCEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH KNLEHLINQFFLSADFMALAAETQKDYKRNSTRLLPVFGKMHPDNVKPQHIRKYMDKRGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCC KSKTQANHEKRFLSRVYRWGYERGITKGNPCSGVRQFKEEARDRYITDAEYEALYSVAPA CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCHH TVRIAMEIAYLCCARQSDVLSLTKSQLLDDGIFICQGKTGKKQIKAWTERLKKVIDLADS HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHC LPASQGVNSIYVLHQPNGNRYTRDGFNSSWAKARAKASVLHPELTFDFTFHDLKAKGISD CCHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEHHHHHCCCHH LEGSLSEKQAISGHKSIGQTARYNRKTEIVPVVGGQKK HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA