| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059120
Identifier: 85059120
GI number: 85059120
Start: 1898691
End: 1899266
Strand: Reverse
Name: 85059120
Synonym: SG1142
Alternate gene names: NA
Gene position: 1899266-1898691 (Counterclockwise)
Preceding gene: 85059128
Following gene: 85059119
Centisome position: 45.53
GC content: 52.95
Gene sequence:
>576_bases ATGACCAAAATCATTGCCTACAAAGGCTTTAACGCCGACCTGACTTGCCGTGGTTATCAGTTCGAGATCGGGAAAACCTA CCAGCACGAGCGCGCGGTAGAAGTTTGCAGTTCAGATTTTCACGCCTGCGAATATCCGCTTGACGTCTTTAATTACGACG AGCCTGCAAATCATCGTTTTGCCGAGGTTGAAGTATCCGGCGATATCGCCCATGAAGCGGGAAGCAGCAAACTCGCCAGT AGCACAATTACCATCAAGAAGGCGCTGTCCCTCCACCAAATGGTTGGCCGCGCCGTCGAGTGCATAGCGAGTAAAATTGA TAAGTCCGCAGAACAGACGATCATTGAAGGCGACGGGTCCGCCGCAGACGTTAGTGGCGTCGGATCGGTTGCCGCGTCTC TCGGCGCACAGGGTAAGGCTAAAGCCGCTGAGGGCAGCGCAATCGTACTGTGCTACCGCAATAGTGAGGGCGACATTATC CACATTCGCGCCAGCAAGATTGGCGACAACGGCGTGAAACTGGATACCTGGTATGTGCTTAATGCAAACGGCGAATTTGA AGAAGACGATGGTTGA
Upstream 100 bases:
>100_bases CGCGAACAGGTGCTCGTGACGCCTAAGGGACTGGCGAAACTCTCCCAAACGTTCTGCCTCGAACCGGCATAACCCATCAA CCTCAATACGGACAAACACC
Downstream 100 bases:
>100_bases TCACACCAAAATGTGAAATATAAAAGGAATTTAACCATGTTTAAAACGTTCTGGACACTGAAGATTATCAACGCGCTGTT CATTATTTCATGCGTTGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MTKIIAYKGFNADLTCRGYQFEIGKTYQHERAVEVCSSDFHACEYPLDVFNYDEPANHRFAEVEVSGDIAHEAGSSKLAS STITIKKALSLHQMVGRAVECIASKIDKSAEQTIIEGDGSAADVSGVGSVAASLGAQGKAKAAEGSAIVLCYRNSEGDII HIRASKIGDNGVKLDTWYVLNANGEFEEDDG
Sequences:
>Translated_191_residues MTKIIAYKGFNADLTCRGYQFEIGKTYQHERAVEVCSSDFHACEYPLDVFNYDEPANHRFAEVEVSGDIAHEAGSSKLAS STITIKKALSLHQMVGRAVECIASKIDKSAEQTIIEGDGSAADVSGVGSVAASLGAQGKAKAAEGSAIVLCYRNSEGDII HIRASKIGDNGVKLDTWYVLNANGEFEEDDG >Mature_190_residues TKIIAYKGFNADLTCRGYQFEIGKTYQHERAVEVCSSDFHACEYPLDVFNYDEPANHRFAEVEVSGDIAHEAGSSKLASS TITIKKALSLHQMVGRAVECIASKIDKSAEQTIIEGDGSAADVSGVGSVAASLGAQGKAKAAEGSAIVLCYRNSEGDIIH IRASKIGDNGVKLDTWYVLNANGEFEEDDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20427; Mature: 20296
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIIAYKGFNADLTCRGYQFEIGKTYQHERAVEVCSSDFHACEYPLDVFNYDEPANHRF CCEEEEEECCCCCEEEECEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCEE AEVEVSGDIAHEAGSSKLASSTITIKKALSLHQMVGRAVECIASKIDKSAEQTIIEGDGS EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCC AADVSGVGSVAASLGAQGKAKAAEGSAIVLCYRNSEGDIIHIRASKIGDNGVKLDTWYVL CCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCEEEEEEEEE NANGEFEEDDG CCCCCCCCCCC >Mature Secondary Structure TKIIAYKGFNADLTCRGYQFEIGKTYQHERAVEVCSSDFHACEYPLDVFNYDEPANHRF CEEEEEECCCCCEEEECEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCEE AEVEVSGDIAHEAGSSKLASSTITIKKALSLHQMVGRAVECIASKIDKSAEQTIIEGDGS EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCC AADVSGVGSVAASLGAQGKAKAAEGSAIVLCYRNSEGDIIHIRASKIGDNGVKLDTWYVL CCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCEEEEEEEEE NANGEFEEDDG CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA