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The map label for this gene is ompA [H]

Identifier: 85059008

GI number: 85059008

Start: 1702506

End: 1703576

Strand: Reverse

Name: ompA [H]

Synonym: SG1030

Alternate gene names: 85059008

Gene position: 1703576-1702506 (Counterclockwise)

Preceding gene: 85059010

Following gene: 85059007

Centisome position: 40.84

GC content: 57.05

Gene sequence:

>1071_bases
ATGAAAAAGACAGCTATCGCACTTGCAGTGGCACTGGCAGGTTTCGCAACCGTAGCGCAAGCCGCTCCGAAAGACGACAC
CTGGTACACTGGCGGCAAACTGGGCTGGTCCCAGTACCACGACACCGGTTTCTACGGTAACGGTTTCGACAACCGCATCG
CCAACGGTCCTACCCGTGATGACCAGTTGGGCGCGGGTGCTTTTCTAGGCTATCAGGCGAACCCTTACTTGGGCTTCGAG
CTGGGCTATGATTGGCTGGGCCGTATGGCGTATAAAGGCAGCGTGAATAACGGTGCTTTCAAAGCGCAGGGCATTTCCCT
CGCAGCCAAGCTGAGCTACCCGCTGACCGACGACCTGGACATCTACACCCGTTTGGGCGGCATGGTATGGCGTGCTGATT
CCAAAGGTGCTTACGACAACGGCAATGCCGGCCGCGTAAGCGACCATGATACCGGCGTTTCGCCGCTGGCCGCTGTGGGT
CTGGAATATGCCTGGACCAAAAACTGGGCTACCCGTCTGGACTACCAGTGGGTTAACAACATCGGTGATGCCGGTACCGT
CGGTACCCGTCCTGATAACTCCATGCTGAGCGTTGGCGTGTCCTACCGCTTCGGCCAGGATGAAGTAGCTCCTCCGGCTC
CGGCTCCGGCTCCGGTTGTTCAGACCAAGCACTTCACCCTGAAGTCTGACGTACTGTTCAACTTCGACAAAGCCACCCTG
AAACCGGAAGGTCAGCAGGCGCTGGATCAGCTGTACTCTCAGCTGAGCTCGATGGATCCGAAAGACGGTTCTGTCGTCGT
TCTGGGCTATACCGACCGTATCGGTACCGAGCAGTACAACCAGAAACTCTCGCAGGAACGCGCTCAGAGCGTCGTAAGTT
ACCTGGTTTCTAAAGGTATCCCTTCCGATAAGATTTCCGCACGCGGTATGGGTAAATCCAACCCGGTTACCGGCAATACC
TGTAACAGCGTGAAAGGCCGCGCCGCAGTCATCAGCTGCCTGGCCCCGGATCGTCGCGTAGAGATCGAAGTGAAAGGCAT
CAAAGACGTGGTAACCCAGCCGCAGGATTAA

Upstream 100 bases:

>100_bases
ATGCACAAAGTCTGAACACGGAGCACGAACGCCGGCAATGGATTTCTAAAATTAGCTTTAAAAGCTCATTGCCTATTTAG
ATGATAACGAGGCGCAAACA

Downstream 100 bases:

>100_bases
GTTATCATGACGCTATAAAAACCCCGCTCCGGCGGGGTTTTTTATTTTGGAACTATTAGTAATTGACGCCTCTATTCAAT
GGGTTAACCCTTCTTTATGG

Product: outer membrane protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MKKTAIALAVALAGFATVAQAAPKDDTWYTGGKLGWSQYHDTGFYGNGFDNRIANGPTRDDQLGAGAFLGYQANPYLGFE
LGYDWLGRMAYKGSVNNGAFKAQGISLAAKLSYPLTDDLDIYTRLGGMVWRADSKGAYDNGNAGRVSDHDTGVSPLAAVG
LEYAWTKNWATRLDYQWVNNIGDAGTVGTRPDNSMLSVGVSYRFGQDEVAPPAPAPAPVVQTKHFTLKSDVLFNFDKATL
KPEGQQALDQLYSQLSSMDPKDGSVVVLGYTDRIGTEQYNQKLSQERAQSVVSYLVSKGIPSDKISARGMGKSNPVTGNT
CNSVKGRAAVISCLAPDRRVEIEVKGIKDVVTQPQD

Sequences:

>Translated_356_residues
MKKTAIALAVALAGFATVAQAAPKDDTWYTGGKLGWSQYHDTGFYGNGFDNRIANGPTRDDQLGAGAFLGYQANPYLGFE
LGYDWLGRMAYKGSVNNGAFKAQGISLAAKLSYPLTDDLDIYTRLGGMVWRADSKGAYDNGNAGRVSDHDTGVSPLAAVG
LEYAWTKNWATRLDYQWVNNIGDAGTVGTRPDNSMLSVGVSYRFGQDEVAPPAPAPAPVVQTKHFTLKSDVLFNFDKATL
KPEGQQALDQLYSQLSSMDPKDGSVVVLGYTDRIGTEQYNQKLSQERAQSVVSYLVSKGIPSDKISARGMGKSNPVTGNT
CNSVKGRAAVISCLAPDRRVEIEVKGIKDVVTQPQD
>Mature_356_residues
MKKTAIALAVALAGFATVAQAAPKDDTWYTGGKLGWSQYHDTGFYGNGFDNRIANGPTRDDQLGAGAFLGYQANPYLGFE
LGYDWLGRMAYKGSVNNGAFKAQGISLAAKLSYPLTDDLDIYTRLGGMVWRADSKGAYDNGNAGRVSDHDTGVSPLAAVG
LEYAWTKNWATRLDYQWVNNIGDAGTVGTRPDNSMLSVGVSYRFGQDEVAPPAPAPAPVVQTKHFTLKSDVLFNFDKATL
KPEGQQALDQLYSQLSSMDPKDGSVVVLGYTDRIGTEQYNQKLSQERAQSVVSYLVSKGIPSDKISARGMGKSNPVTGNT
CNSVKGRAAVISCLAPDRRVEIEVKGIKDVVTQPQD

Specific function: Required for the action of colicins K and L and for the stabilization of mating aggregates in conjugation. Serves as a receptor for a number of T-even like phages. Also acts as a porin with low permeability that allows slow penetration of small solutes [H

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787191, Length=358, Percent_Identity=75.9776536312849, Blast_Score=539, Evalue=1e-155,
Organism=Escherichia coli, GI48994946, Length=120, Percent_Identity=35.8333333333333, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR006664
- InterPro:   IPR002368
- InterPro:   IPR006690
- InterPro:   IPR000498
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA; PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 38303; Mature: 38303

Theoretical pI: Translated: 7.48; Mature: 7.48

Prosite motif: PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTAIALAVALAGFATVAQAAPKDDTWYTGGKLGWSQYHDTGFYGNGFDNRIANGPTRD
CCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC
DQLGAGAFLGYQANPYLGFELGYDWLGRMAYKGSVNNGAFKAQGISLAAKLSYPLTDDLD
CCCCCCEEECCCCCCCEEEECCHHHHHHHHCCCCCCCCCEEECCEEEEEEECCCCCCCHH
IYTRLGGMVWRADSKGAYDNGNAGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDYQWVNN
HHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCHHHHCCHHHHHC
IGDAGTVGTRPDNSMLSVGVSYRFGQDEVAPPAPAPAPVVQTKHFTLKSDVLFNFDKATL
CCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEECCEEEEECCEEEECCCCCC
KPEGQQALDQLYSQLSSMDPKDGSVVVLGYTDRIGTEQYNQKLSQERAQSVVSYLVSKGI
CCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PSDKISARGMGKSNPVTGNTCNSVKGRAAVISCLAPDRRVEIEVKGIKDVVTQPQD
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECHHHHHCCCCC
>Mature Secondary Structure
MKKTAIALAVALAGFATVAQAAPKDDTWYTGGKLGWSQYHDTGFYGNGFDNRIANGPTRD
CCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC
DQLGAGAFLGYQANPYLGFELGYDWLGRMAYKGSVNNGAFKAQGISLAAKLSYPLTDDLD
CCCCCCEEECCCCCCCEEEECCHHHHHHHHCCCCCCCCCEEECCEEEEEEECCCCCCCHH
IYTRLGGMVWRADSKGAYDNGNAGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDYQWVNN
HHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCHHHHCCHHHHHC
IGDAGTVGTRPDNSMLSVGVSYRFGQDEVAPPAPAPAPVVQTKHFTLKSDVLFNFDKATL
CCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEECCEEEEECCEEEECCCCCC
KPEGQQALDQLYSQLSSMDPKDGSVVVLGYTDRIGTEQYNQKLSQERAQSVVSYLVSKGI
CCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PSDKISARGMGKSNPVTGNTCNSVKGRAAVISCLAPDRRVEIEVKGIKDVVTQPQD
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 6092858 [H]