| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
Click here to switch to the map view.
The map label for this gene is yejA [H]
Identifier: 85058929
GI number: 85058929
Start: 1555054
End: 1556859
Strand: Reverse
Name: yejA [H]
Synonym: SG0951
Alternate gene names: 85058929
Gene position: 1556859-1555054 (Counterclockwise)
Preceding gene: 85058930
Following gene: 85058928
Centisome position: 37.32
GC content: 56.31
Gene sequence:
>1806_bases ATGTTTCCACGTTTTTGGCTGGCGCTGTTCTTCAGCGTTATCTGCCTGTGCGCCCGAGGCGAACCATTGCATGACGGCTA TGCTTTCGCGCTGTTGGGCGAACCGCACTACCCGCCTGACTTTACCCATTTCGACTATGTTAATCCGGCCGCGCCCAAGG GTGGCAGCGTGACCATGGCCGCCATCGGCACCTTCGATAATTTCAACCGTTACGCCTCGCGCGGCACGGCGGCGGCGCGT ACGGAACAGCTTTATGACAGCCTGTATGTCATCTCCGATGACGAAGTGGGCAGCTATTATCCGCTCGTCGCCGAATCGGC CCGTTATCGCGCCAATTATGCCTGGGCAGAAATCACGCTCAATCCACGGGCCCGCTACCATAATCATCAACCGATTACCG CCGCCGATGTCGAGTTCACTTTCAATAAGTTTATGACCGAGGGCGTCCCCCAATTCCGGGTGTTCTTTAAAGGGGTAAAG GTGAAGGCTATCTCGCGGCTAACGGTCCGCTACGAATTTCCCGAGCCCAACAAAGATACGTTATTAAGGCTTCTTACTCT GCCGATACTTCCGGAGAGCTTTTGGTCGCAGCATAAACTGAGCGATCCCCTCACTTTCCCCCCTCCCGCCAGCGGCCCCT ATCGCATCACCGCCTGGCGCACGGGCCAATCCGTGACGTATAGCCGGGTGAAGGATTATTGGGCGACCACGCTGCCGGTC AATGTCGGGCGCTACAACTTTGATACACTGCGCTATGACTATTATCTCGATGATAATGTCTCTATGGAGGCTTTCAAAGC CGGGGCTTTCGATCTGCGCATTGAAAGCTCACCCAAAAAATGGGCGACCCAGTACCGCGGCGGTAACTTCGACCGCGGTT TTATCGTTCATCGCGAATTGGCCAACAACGCGCCGGTGGGGACACCCTGGCTGAGCTTCAACATTCAGCGGCCGCTGTTT GCCGACCGTCGCGTCCGCGAGGCGCTGTCGCTGGCGTTCGATTTTGAATGGATGAACAAGGCGCTGTTTTATAATGGCTA TCAGCGCGTTAACAGTTACTTTATGAACACCGACTATGCCGCGCGCGCTTATCCGGACACCGCCGAGCTGACGCTACTGG CGCCGCTGAAAAAGCTGGTGCCGCCGAAGGTCTTTAGCGCGATTTACCAGCCGCCGGTGTCCGACGGCAGCGGCTACGAC CGCCGCAACCTACTCAAGGCGCTGGCGTTGCTAAAACAAGCCGGCTGGACGCTACGCAATCAGCGCCTGGTCGACGCCCA GGGCAAACCGTTCAGCTTTGAATTGTTGGTGATGAGCGGCGGCAATAATCAATATATATTGCCTTTTCAGCACAGCCTGT CCCGCCTCGGCATCGCCATGACGGTACGCGAAGTAGACAGCGCCCAATTTATTAACCGCCTGCGTAAACGGGATTTCGAT ATGATCCCCTCCACCTACGGCGTGTACGCCTTTCCCAGTAGCGATCTGCAAATCATTTGGGGTTCGGCGTACGTGAAGTC CACCTATAACCGTCCCGGGGTAAAAGACCCCGCAGTCGACTCGCTGATTAACCAAATCGTGCGCCATCAGGGCGATAAAG CGGTGTTACTGCCGCTAGGAAGGGCTTTGGACCGCGTGTTAACCTGGAATTATTTTATGATCCCGCTGTGGTATTCGCAT CATATCCGCCTGGCCTACTGGGACAAATTCGCCATGCCCGCCCAACGCCCCGCTTATGATCTGGGTTTCGACAGCTGGTG GTATGATGTCAATAATGCGGCGCAGCTGCCCGCCCAGCGGCGCTAA
Upstream 100 bases:
>100_bases GAACAATTATGGTAAAAAAACCATTATAGTCCTCAATAGTATCGCTGATTAATCTCTCCATTCCCTCCAGCGATGCATAA CGATGCAGGAGCATAAGCTG
Downstream 100 bases:
>100_bases CGAGGAGGAGTGGCTTGACATCTTATTTACTAAAACGCCTGCTGTTAATTATCCCCACGCTGTGGGCCATTATCACGCTC AACTTCTTTATCGTGCAAAT
Product: hypothetical protein
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 601; Mature: 601
Protein sequence:
>601_residues MFPRFWLALFFSVICLCARGEPLHDGYAFALLGEPHYPPDFTHFDYVNPAAPKGGSVTMAAIGTFDNFNRYASRGTAAAR TEQLYDSLYVISDDEVGSYYPLVAESARYRANYAWAEITLNPRARYHNHQPITAADVEFTFNKFMTEGVPQFRVFFKGVK VKAISRLTVRYEFPEPNKDTLLRLLTLPILPESFWSQHKLSDPLTFPPPASGPYRITAWRTGQSVTYSRVKDYWATTLPV NVGRYNFDTLRYDYYLDDNVSMEAFKAGAFDLRIESSPKKWATQYRGGNFDRGFIVHRELANNAPVGTPWLSFNIQRPLF ADRRVREALSLAFDFEWMNKALFYNGYQRVNSYFMNTDYAARAYPDTAELTLLAPLKKLVPPKVFSAIYQPPVSDGSGYD RRNLLKALALLKQAGWTLRNQRLVDAQGKPFSFELLVMSGGNNQYILPFQHSLSRLGIAMTVREVDSAQFINRLRKRDFD MIPSTYGVYAFPSSDLQIIWGSAYVKSTYNRPGVKDPAVDSLINQIVRHQGDKAVLLPLGRALDRVLTWNYFMIPLWYSH HIRLAYWDKFAMPAQRPAYDLGFDSWWYDVNNAAQLPAQRR
Sequences:
>Translated_601_residues MFPRFWLALFFSVICLCARGEPLHDGYAFALLGEPHYPPDFTHFDYVNPAAPKGGSVTMAAIGTFDNFNRYASRGTAAAR TEQLYDSLYVISDDEVGSYYPLVAESARYRANYAWAEITLNPRARYHNHQPITAADVEFTFNKFMTEGVPQFRVFFKGVK VKAISRLTVRYEFPEPNKDTLLRLLTLPILPESFWSQHKLSDPLTFPPPASGPYRITAWRTGQSVTYSRVKDYWATTLPV NVGRYNFDTLRYDYYLDDNVSMEAFKAGAFDLRIESSPKKWATQYRGGNFDRGFIVHRELANNAPVGTPWLSFNIQRPLF ADRRVREALSLAFDFEWMNKALFYNGYQRVNSYFMNTDYAARAYPDTAELTLLAPLKKLVPPKVFSAIYQPPVSDGSGYD RRNLLKALALLKQAGWTLRNQRLVDAQGKPFSFELLVMSGGNNQYILPFQHSLSRLGIAMTVREVDSAQFINRLRKRDFD MIPSTYGVYAFPSSDLQIIWGSAYVKSTYNRPGVKDPAVDSLINQIVRHQGDKAVLLPLGRALDRVLTWNYFMIPLWYSH HIRLAYWDKFAMPAQRPAYDLGFDSWWYDVNNAAQLPAQRR >Mature_601_residues MFPRFWLALFFSVICLCARGEPLHDGYAFALLGEPHYPPDFTHFDYVNPAAPKGGSVTMAAIGTFDNFNRYASRGTAAAR TEQLYDSLYVISDDEVGSYYPLVAESARYRANYAWAEITLNPRARYHNHQPITAADVEFTFNKFMTEGVPQFRVFFKGVK VKAISRLTVRYEFPEPNKDTLLRLLTLPILPESFWSQHKLSDPLTFPPPASGPYRITAWRTGQSVTYSRVKDYWATTLPV NVGRYNFDTLRYDYYLDDNVSMEAFKAGAFDLRIESSPKKWATQYRGGNFDRGFIVHRELANNAPVGTPWLSFNIQRPLF ADRRVREALSLAFDFEWMNKALFYNGYQRVNSYFMNTDYAARAYPDTAELTLLAPLKKLVPPKVFSAIYQPPVSDGSGYD RRNLLKALALLKQAGWTLRNQRLVDAQGKPFSFELLVMSGGNNQYILPFQHSLSRLGIAMTVREVDSAQFINRLRKRDFD MIPSTYGVYAFPSSDLQIIWGSAYVKSTYNRPGVKDPAVDSLINQIVRHQGDKAVLLPLGRALDRVLTWNYFMIPLWYSH HIRLAYWDKFAMPAQRPAYDLGFDSWWYDVNNAAQLPAQRR
Specific function: Unknown
COG id: COG4166
COG function: function code E; ABC-type oligopeptide transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae hbpA [H]
Homologues:
Organism=Escherichia coli, GI87082063, Length=596, Percent_Identity=63.255033557047, Blast_Score=817, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 69035; Mature: 69035
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPRFWLALFFSVICLCARGEPLHDGYAFALLGEPHYPPDFTHFDYVNPAAPKGGSVTMA CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEE AIGTFDNFNRYASRGTAAARTEQLYDSLYVISDDEVGSYYPLVAESARYRANYAWAEITL EEECCHHHHHHHHCCCHHHHHHHHHHCEEEEECCCCCCCCCHHHCCCHHCCEEEEEEEEE NPRARYHNHQPITAADVEFTFNKFMTEGVPQFRVFFKGVKVKAISRLTVRYEFPEPNKDT CCHHHCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHCCEEEEEEEEEEEEECCCCCHHH LLRLLTLPILPESFWSQHKLSDPLTFPPPASGPYRITAWRTGQSVTYSRVKDYWATTLPV HHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHEEECEE NVGRYNFDTLRYDYYLDDNVSMEAFKAGAFDLRIESSPKKWATQYRGGNFDRGFIVHREL ECCCEECCEEEEEEEECCCCCHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCCEEEEEEC ANNAPVGTPWLSFNIQRPLFADRRVREALSLAFDFEWMNKALFYNGYQRVNSYFMNTDYA CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC ARAYPDTAELTLLAPLKKLVPPKVFSAIYQPPVSDGSGYDRRNLLKALALLKQAGWTLRN CCCCCCCCCEEEEHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC QRLVDAQGKPFSFELLVMSGGNNQYILPFQHSLSRLGIAMTVREVDSAQFINRLRKRDFD CEEECCCCCCEEEEEEEEECCCCEEEEEHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCC MIPSTYGVYAFPSSDLQIIWGSAYVKSTYNRPGVKDPAVDSLINQIVRHQGDKAVLLPLG CCCCCCCEEEECCCCCEEEECCCEEHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEHHH RALDRVLTWNYFMIPLWYSHHIRLAYWDKFAMPAQRPAYDLGFDSWWYDVNNAAQLPAQR HHHHHHHCCCEEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCHHCCCCCC R C >Mature Secondary Structure MFPRFWLALFFSVICLCARGEPLHDGYAFALLGEPHYPPDFTHFDYVNPAAPKGGSVTMA CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEE AIGTFDNFNRYASRGTAAARTEQLYDSLYVISDDEVGSYYPLVAESARYRANYAWAEITL EEECCHHHHHHHHCCCHHHHHHHHHHCEEEEECCCCCCCCCHHHCCCHHCCEEEEEEEEE NPRARYHNHQPITAADVEFTFNKFMTEGVPQFRVFFKGVKVKAISRLTVRYEFPEPNKDT CCHHHCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHCCEEEEEEEEEEEEECCCCCHHH LLRLLTLPILPESFWSQHKLSDPLTFPPPASGPYRITAWRTGQSVTYSRVKDYWATTLPV HHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHEEECEE NVGRYNFDTLRYDYYLDDNVSMEAFKAGAFDLRIESSPKKWATQYRGGNFDRGFIVHREL ECCCEECCEEEEEEEECCCCCHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCCEEEEEEC ANNAPVGTPWLSFNIQRPLFADRRVREALSLAFDFEWMNKALFYNGYQRVNSYFMNTDYA CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC ARAYPDTAELTLLAPLKKLVPPKVFSAIYQPPVSDGSGYDRRNLLKALALLKQAGWTLRN CCCCCCCCCEEEEHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC QRLVDAQGKPFSFELLVMSGGNNQYILPFQHSLSRLGIAMTVREVDSAQFINRLRKRDFD CEEECCCCCCEEEEEEEEECCCCEEEEEHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCC MIPSTYGVYAFPSSDLQIIWGSAYVKSTYNRPGVKDPAVDSLINQIVRHQGDKAVLLPLG CCCCCCCEEEECCCCCEEEECCCEEHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEHHH RALDRVLTWNYFMIPLWYSHHIRLAYWDKFAMPAQRPAYDLGFDSWWYDVNNAAQLPAQR HHHHHHHCCCEEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCHHCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 9097040 [H]