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The map label for this gene is ybhB [H]

Identifier: 85058879

GI number: 85058879

Start: 1463992

End: 1464369

Strand: Reverse

Name: ybhB [H]

Synonym: SG0901

Alternate gene names: 85058879

Gene position: 1464369-1463992 (Counterclockwise)

Preceding gene: 85058880

Following gene: 85058876

Centisome position: 35.11

GC content: 58.2

Gene sequence:

>378_bases
GTGTTTACCTTATTTAGCCACGATCTGCAGCCCGGCACGACGCTACCCGAGCGCCATGTGTTCAACGGTATGGGATATCA
AGGGGATAATATTTCGCTGCACCTGGCCTGGGATAATGTCCCAGCAGGCACGAAAAGTTTTGTCATTACGGTGTTTGATT
CCAGACGCGCCGACCGGCTCTGGCTGGTGGCCAATATTCCGGCGGATGTCCGTATGCTGCCCCAAGGGGCGGGCTCCGGT
CAGGACAATCTGCCTGCGGGCGCCGTGCAGGGATGTACAGATTTTGGCAGTGCAGGCTACGGCGCCGCCGCAGGGAGAAA
CGCATCGCTACCAGTTCACCGTGCATGCGCTGGATGTGGATCATCTGGAGGTGGATGA

Upstream 100 bases:

>100_bases
GGCCATTTGGTCACCGACCAGAACCCGGCCTCGTCGACGGCCACCGCGCAAAATTTATTAAAAATCCTCAACCGCTAATG
CCTGAAAGGAGAAGAGCCGC

Downstream 100 bases:

>100_bases
AAACGCCAGAGGCACGATGATTGGCTTCAACGTGCATTTCCACACCCTGGGCAGTGCGTCGTTGACCGTCACTTACCGTT
AATGCGACGGCCCGCAGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MFTLFSHDLQPGTTLPERHVFNGMGYQGDNISLHLAWDNVPAGTKSFVITVFDSRRADRLWLVANIPADVRMLPQGAGSG
QDNLPAGAVQGCTDFGSAGYGAAAGRNASLPVHRACAGCGSSGGG

Sequences:

>Translated_125_residues
MFTLFSHDLQPGTTLPERHVFNGMGYQGDNISLHLAWDNVPAGTKSFVITVFDSRRADRLWLVANIPADVRMLPQGAGSG
QDNLPAGAVQGCTDFGSAGYGAAAGRNASLPVHRACAGCGSSGGG
>Mature_125_residues
MFTLFSHDLQPGTTLPERHVFNGMGYQGDNISLHLAWDNVPAGTKSFVITVFDSRRADRLWLVANIPADVRMLPQGAGSG
QDNLPAGAVQGCTDFGSAGYGAAAGRNASLPVHRACAGCGSSGGG

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786990, Length=105, Percent_Identity=59.0476190476191, Blast_Score=121, Evalue=1e-29,
Organism=Escherichia coli, GI1786757, Length=117, Percent_Identity=43.5897435897436, Blast_Score=86, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 12933; Mature: 12933

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTLFSHDLQPGTTLPERHVFNGMGYQGDNISLHLAWDNVPAGTKSFVITVFDSRRADRL
CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCEE
WLVANIPADVRMLPQGAGSGQDNLPAGAVQGCTDFGSAGYGAAAGRNASLPVHRACAGCG
EEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
SSGGG
CCCCC
>Mature Secondary Structure
MFTLFSHDLQPGTTLPERHVFNGMGYQGDNISLHLAWDNVPAGTKSFVITVFDSRRADRL
CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCEE
WLVANIPADVRMLPQGAGSGQDNLPAGAVQGCTDFGSAGYGAAAGRNASLPVHRACAGCG
EEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
SSGGG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058702; 9278503; 11439028 [H]