| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
Click here to switch to the map view.
The map label for this gene is 85058798
Identifier: 85058798
GI number: 85058798
Start: 1379904
End: 1380515
Strand: Reverse
Name: 85058798
Synonym: SG0820
Alternate gene names: NA
Gene position: 1380515-1379904 (Counterclockwise)
Preceding gene: 85058799
Following gene: 85058797
Centisome position: 33.1
GC content: 52.94
Gene sequence:
>612_bases ATGAGCGAAGTAAATAAAGAAAACTACATGAAAGACCGCAAGGGGCGTCTGGTGCCGGTTGACCAGGTGTCTGACTATGA CCTTGCGATGGACTCTTTCGTTAAAGAACAGGTTGTCGCCGCGAAGGTTAAACGCGATGAACTCAGTGACTTCAAGCGTC GTGCCTTTGACGAGTGCTATGCCTGGCTTGACCTTGTGGCCGAGAAGTACGGCAGAACGCGTGGCGGTGCCAAAGGCAAC GTGACCTTCAGCAGCTTCGACGGTGCTCAGCAGATCACCATCCGCGTGCAGGAAACCCTGACCTTCGGGCCAGAGCTGCA GATTGCCAAAGACCTGATAGACGAGTGCGTCACCGAGTGGTCGGAAGGCGCGAACGCCAACCTGCGGGCCATCATCAGCG ATGCTTTTCAGGTGGACAAAGAGGGCCAGCTTAATACCGGACGTATTCTTTCCCTGCGCCGCGTCAAGATTCAGGACGAG CGCTGGAACCGGGCAATGGAGGCCATATCGGAATCACTGCAGGTGGCAATGTCCAAAACCTATATTAATTTCCGGGAGAA AGATAAACACGGGAAGCTAATTAATATTCCGTTAGATATCGCTGCCATTTAA
Upstream 100 bases:
>100_bases GCCATGACGGCTCAGGGCGCTTCCGTCAGGGTGTCTTTGAGTTGCATGGCTGCCGTATTACCTGGTCAGAGTCGTTACAT TAACCATAAGGTGAACAGAG
Downstream 100 bases:
>100_bases TTTTAATTCAATTTCTTTTTATTTCGGCGTCAGTGCCGTGGGCTTCTGCACGCCGAAAACAGCATTAAGGAATAAATCAT GTCCATCAAATGTATCAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MSEVNKENYMKDRKGRLVPVDQVSDYDLAMDSFVKEQVVAAKVKRDELSDFKRRAFDECYAWLDLVAEKYGRTRGGAKGN VTFSSFDGAQQITIRVQETLTFGPELQIAKDLIDECVTEWSEGANANLRAIISDAFQVDKEGQLNTGRILSLRRVKIQDE RWNRAMEAISESLQVAMSKTYINFREKDKHGKLINIPLDIAAI
Sequences:
>Translated_203_residues MSEVNKENYMKDRKGRLVPVDQVSDYDLAMDSFVKEQVVAAKVKRDELSDFKRRAFDECYAWLDLVAEKYGRTRGGAKGN VTFSSFDGAQQITIRVQETLTFGPELQIAKDLIDECVTEWSEGANANLRAIISDAFQVDKEGQLNTGRILSLRRVKIQDE RWNRAMEAISESLQVAMSKTYINFREKDKHGKLINIPLDIAAI >Mature_202_residues SEVNKENYMKDRKGRLVPVDQVSDYDLAMDSFVKEQVVAAKVKRDELSDFKRRAFDECYAWLDLVAEKYGRTRGGAKGNV TFSSFDGAQQITIRVQETLTFGPELQIAKDLIDECVTEWSEGANANLRAIISDAFQVDKEGQLNTGRILSLRRVKIQDER WNRAMEAISESLQVAMSKTYINFREKDKHGKLINIPLDIAAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23114; Mature: 22983
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVNKENYMKDRKGRLVPVDQVSDYDLAMDSFVKEQVVAAKVKRDELSDFKRRAFDECY CCCCCCHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWLDLVAEKYGRTRGGAKGNVTFSSFDGAQQITIRVQETLTFGPELQIAKDLIDECVTEW HHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEEEEHHCCCCCHHHHHHHHHHHHHHH SEGANANLRAIISDAFQVDKEGQLNTGRILSLRRVKIQDERWNRAMEAISESLQVAMSKT HCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEHEEECHHHHHHHHHHHHHHHHHHHHHH YINFREKDKHGKLINIPLDIAAI HHCHHCCCCCCCEEECCCEEECC >Mature Secondary Structure SEVNKENYMKDRKGRLVPVDQVSDYDLAMDSFVKEQVVAAKVKRDELSDFKRRAFDECY CCCCCHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWLDLVAEKYGRTRGGAKGNVTFSSFDGAQQITIRVQETLTFGPELQIAKDLIDECVTEW HHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEEEEHHCCCCCHHHHHHHHHHHHHHH SEGANANLRAIISDAFQVDKEGQLNTGRILSLRRVKIQDERWNRAMEAISESLQVAMSKT HCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEHEEECHHHHHHHHHHHHHHHHHHHHHH YINFREKDKHGKLINIPLDIAAI HHCHHCCCCCCCEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA