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The map label for this gene is resD [H]

Identifier: 85058745

GI number: 85058745

Start: 1278299

End: 1279018

Strand: Reverse

Name: resD [H]

Synonym: SG0767

Alternate gene names: 85058745

Gene position: 1279018-1278299 (Counterclockwise)

Preceding gene: 85058746

Following gene: 85058744

Centisome position: 30.66

GC content: 59.31

Gene sequence:

>720_bases
ATGGAAGAAAAGCCTAAAAACCTATCCGATGAGGATCCGGTGCGGATCGATTTATTCTCGTCGAAAACGCTTTACAGATG
CGCGAAAATACGTTCAACACCCGCAGACAACGGAGAACGAAAGTTTGGGTACTTTTTCCCTGCGAAAATGACGCAGATTT
CATACAGCGACTCCAGTGATCACAATCTGACCAGAACGGGCGCCGCCCGCTATTTTGACTACGAAAGTGCGGTCGCGCTG
CGCAACCTGGCGGCCGCCTACGGCACCGACATGCCGCGCTACCTGCTGGCCCCCGAAGTAGCCGTGCTGCTTTCAAAGGT
GACCGATCTCCGCAAACGTCTGTTTATCGATGCCCTCTGGAACACGGGGGGCCGGCTCAATGAAATTCTGCCGCTTACAC
GGGGCGATTTTGTGCTGGACGATCCGCTGACCGGCACACCCCTCTCTCTTCGCCGTTTGTGGTGCTGCGTACCCTCAAGC
AGCGTCGCCTTGAAGAATCCGCCGTTAGCCGTTCACGGCGCCGCGGCCGGCCGACAAAGGAGCAGCAGCAGGCCCAGCGG
GAAGTGGAAGCGGAAATACGCGATAATCCGCCGCGTGCCGTGCCCCTCACCGATCCTGCTTTCGTTCAGCGACTCCGTGA
ATGGTTCGCGACCGTGCCGCCTGCCGCCGGCGCCCGGCTCTGGGATGCCAGGAGTGAAGACACCGCCCGCAGCTGGATAA

Upstream 100 bases:

>100_bases
TTTTACACATACATATCAGTTACTTAGGAGTACATCCTGTGCGGGGAGACACCATGAAAATCCACTTTTTATTTCCGGCT
TACCAGGTTATTCTCCGAAT

Downstream 100 bases:

>100_bases
GCCAGGCGGTTAAGGCCGCTAAACATGACAGCGTCACTTTCTCTATCCGGCCCATCACACCCAAGACATTCCGGGATTCG
TTTGCGATGCACCTTGTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: Protein D [H]

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MEEKPKNLSDEDPVRIDLFSSKTLYRCAKIRSTPADNGERKFGYFFPAKMTQISYSDSSDHNLTRTGAARYFDYESAVAL
RNLAAAYGTDMPRYLLAPEVAVLLSKVTDLRKRLFIDALWNTGGRLNEILPLTRGDFVLDDPLTGTPLSLRRLWCCVPSS
SVALKNPPLAVHGAAAGRQRSSSRPSGKWKRKYAIIRRVPCPSPILLSFSDSVNGSRPCRLPPAPGSGMPGVKTPPAAG

Sequences:

>Translated_239_residues
MEEKPKNLSDEDPVRIDLFSSKTLYRCAKIRSTPADNGERKFGYFFPAKMTQISYSDSSDHNLTRTGAARYFDYESAVAL
RNLAAAYGTDMPRYLLAPEVAVLLSKVTDLRKRLFIDALWNTGGRLNEILPLTRGDFVLDDPLTGTPLSLRRLWCCVPSS
SVALKNPPLAVHGAAAGRQRSSSRPSGKWKRKYAIIRRVPCPSPILLSFSDSVNGSRPCRLPPAPGSGMPGVKTPPAAG
>Mature_239_residues
MEEKPKNLSDEDPVRIDLFSSKTLYRCAKIRSTPADNGERKFGYFFPAKMTQISYSDSSDHNLTRTGAARYFDYESAVAL
RNLAAAYGTDMPRYLLAPEVAVLLSKVTDLRKRLFIDALWNTGGRLNEILPLTRGDFVLDDPLTGTPLSLRRLWCCVPSS
SVALKNPPLAVHGAAAGRQRSSSRPSGKWKRKYAIIRRVPCPSPILLSFSDSVNGSRPCRLPPAPGSGMPGVKTPPAAG

Specific function: Acts as a repressor of transcription and as a site- specific resolvase that cleaves at the rfsF site [H]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR016423 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 26211; Mature: 26211

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEKPKNLSDEDPVRIDLFSSKTLYRCAKIRSTPADNGERKFGYFFPAKMTQISYSDSSD
CCCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEECCCCCC
HNLTRTGAARYFDYESAVALRNLAAAYGTDMPRYLLAPEVAVLLSKVTDLRKRLFIDALW
CCEECCCCHHEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NTGGRLNEILPLTRGDFVLDDPLTGTPLSLRRLWCCVPSSSVALKNPPLAVHGAAAGRQR
CCCCCHHHHCCCCCCCEEECCCCCCCCHHHHHEEEECCCCCEEECCCCEEEECCCCCCCC
SSSRPSGKWKRKYAIIRRVPCPSPILLSFSDSVNGSRPCRLPPAPGSGMPGVKTPPAAG
CCCCCCCHHHHHHHHEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEEKPKNLSDEDPVRIDLFSSKTLYRCAKIRSTPADNGERKFGYFFPAKMTQISYSDSSD
CCCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEECCCCCC
HNLTRTGAARYFDYESAVALRNLAAAYGTDMPRYLLAPEVAVLLSKVTDLRKRLFIDALW
CCEECCCCHHEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NTGGRLNEILPLTRGDFVLDDPLTGTPLSLRRLWCCVPSSSVALKNPPLAVHGAAAGRQR
CCCCCHHHHCCCCCCCEEECCCCCCCCHHHHHEEEECCCCCEEECCCCEEEECCCCCCCC
SSSRPSGKWKRKYAIIRRVPCPSPILLSFSDSVNGSRPCRLPPAPGSGMPGVKTPPAAG
CCCCCCCHHHHHHHHEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3027661; 3007930; 6327993 [H]