| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85058718
Identifier: 85058718
GI number: 85058718
Start: 1233752
End: 1234444
Strand: Reverse
Name: 85058718
Synonym: SG0740
Alternate gene names: NA
Gene position: 1234444-1233752 (Counterclockwise)
Preceding gene: 85058719
Following gene: 85058717
Centisome position: 29.59
GC content: 37.37
Gene sequence:
>693_bases ATGAGTGGTGTAGCACTAAAGCGAGAAGCTATTTCTGATCAGATTATCTATATGTGCGAAAACAACCCCAATCCATGTCA TATTCGAGATAGTGAGCACCGATATGCCTATATCAATCCGGCGATGGCTGAATTACTGGATTTGCCGAAAGGTTTTAACA TTGAAGGTAAGCAGATAACAGACATACATCATTGGATGGCAATATTTTTAGACGATATTTACCAACATGATAAAAACGTG ATCGACAACAAGTCTGCGATATCTTTACTCATTACCTCTGCTTTTGGTCGTGAAGACATTGTCCAGCCTTATATTTTTGA TATCCAACCTTTCTTCAACGATAAGGGCCATGTGGTTGGTACTATGGCAGAAGCTAAGCTATGCAGATTTTTCTCACCTC TGCAATATGCAGATGGCGAATCTCCCATAACATTAACCATGAATATGCCTCATAGCTATTTTACAGAACGCGAACTTGAA GTAATATTCTTTACTTATCATGGATTAAGCAGTAAAGAAACAGCGAAACGATTAAAAATTTCTCATAGAACCGTAGAAAA CAGGTTATGTAATCTGTATCAAAAGACACGCGTTAATAACATCTACCAATTTCGAGAGTTTTGCAGAGATATTGAACTTG ATTGCTACATACCGACAAATCTGTTAGTTCCCTCAATTCGAGTTATTGGATAA
Upstream 100 bases:
>100_bases GACTGGTTCAGCGTGAAATAGCGGGCTATCATTTCACAAATAACAACACAATACTGACCATTCATTAAGTAGTTAAATCT CTTTTCAAGGACGATTTTTA
Downstream 100 bases:
>100_bases CTATTATTCATCTGCAAATTTGTTGCCCATATACAGCAACCAAAAACAGAAGTCCCCCGCCCTCATTGACGCAAGGATAA CCCATGCGCTATAGCGCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MSGVALKREAISDQIIYMCENNPNPCHIRDSEHRYAYINPAMAELLDLPKGFNIEGKQITDIHHWMAIFLDDIYQHDKNV IDNKSAISLLITSAFGREDIVQPYIFDIQPFFNDKGHVVGTMAEAKLCRFFSPLQYADGESPITLTMNMPHSYFTERELE VIFFTYHGLSSKETAKRLKISHRTVENRLCNLYQKTRVNNIYQFREFCRDIELDCYIPTNLLVPSIRVIG
Sequences:
>Translated_230_residues MSGVALKREAISDQIIYMCENNPNPCHIRDSEHRYAYINPAMAELLDLPKGFNIEGKQITDIHHWMAIFLDDIYQHDKNV IDNKSAISLLITSAFGREDIVQPYIFDIQPFFNDKGHVVGTMAEAKLCRFFSPLQYADGESPITLTMNMPHSYFTERELE VIFFTYHGLSSKETAKRLKISHRTVENRLCNLYQKTRVNNIYQFREFCRDIELDCYIPTNLLVPSIRVIG >Mature_229_residues SGVALKREAISDQIIYMCENNPNPCHIRDSEHRYAYINPAMAELLDLPKGFNIEGKQITDIHHWMAIFLDDIYQHDKNVI DNKSAISLLITSAFGREDIVQPYIFDIQPFFNDKGHVVGTMAEAKLCRFFSPLQYADGESPITLTMNMPHSYFTERELEV IFFTYHGLSSKETAKRLKISHRTVENRLCNLYQKTRVNNIYQFREFCRDIELDCYIPTNLLVPSIRVIG
Specific function: Unknown
COG id: COG2197
COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26718; Mature: 26587
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGVALKREAISDQIIYMCENNPNPCHIRDSEHRYAYINPAMAELLDLPKGFNIEGKQIT CCCCHHHHHHCCCEEEEEECCCCCCEEEECCCCCEEEECHHHHHHHCCCCCCCCCCCEEH DIHHWMAIFLDDIYQHDKNVIDNKSAISLLITSAFGREDIVQPYIFDIQPFFNDKGHVVG HHHHHHHHHHHHHHHHHCHHCCCCHHHHHEEEHHCCCCCCCCCEEEECCCCCCCCCCEEE TMAEAKLCRFFSPLQYADGESPITLTMNMPHSYFTERELEVIFFTYHGLSSKETAKRLKI EHHHHHHHHHHCCHHCCCCCCCEEEEEECCHHHCCCCCEEEEEEEECCCCCHHHHHHHHH SHRTVENRLCNLYQKTRVNNIYQFREFCRDIELDCYIPTNLLVPSIRVIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEECC >Mature Secondary Structure SGVALKREAISDQIIYMCENNPNPCHIRDSEHRYAYINPAMAELLDLPKGFNIEGKQIT CCCHHHHHHCCCEEEEEECCCCCCEEEECCCCCEEEECHHHHHHHCCCCCCCCCCCEEH DIHHWMAIFLDDIYQHDKNVIDNKSAISLLITSAFGREDIVQPYIFDIQPFFNDKGHVVG HHHHHHHHHHHHHHHHHCHHCCCCHHHHHEEEHHCCCCCCCCCEEEECCCCCCCCCCEEE TMAEAKLCRFFSPLQYADGESPITLTMNMPHSYFTERELEVIFFTYHGLSSKETAKRLKI EHHHHHHHHHHCCHHCCCCCCCEEEEEECCHHHCCCCCEEEEEEEECCCCCHHHHHHHHH SHRTVENRLCNLYQKTRVNNIYQFREFCRDIELDCYIPTNLLVPSIRVIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA