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The map label for this gene is hin [H]

Identifier: 85058687

GI number: 85058687

Start: 1191723

End: 1192313

Strand: Reverse

Name: hin [H]

Synonym: SG0709

Alternate gene names: 85058687

Gene position: 1192313-1191723 (Counterclockwise)

Preceding gene: 85058689

Following gene: 85058684

Centisome position: 28.58

GC content: 42.81

Gene sequence:

>591_bases
ATGGCAAAAATTGGCTATATGAGGGTGTCAAAAAATGACCAAAACACCGATTTACAGCAAAAATCCTTGATTTGCGCAAA
TTGTGAACAGATTTTTGAGGATAAAATCAGTGGAAAAACAGACCAGAGACCGGGATTAAAACGCGCGTTAAACTGCCTGA
AATCGGGTGACACCCTGGTAGTCTGGAAGCTAGATAGATTGGGACGCAGCATTAAACATTTGATTACTTTAATATCCAAA
CTTGAAGATGAAGGTATTCATTTTCATAGTTTGACGGATGCCATTGATACTTCTACGTCCGCAGGCCGTTTTTTCTTTCA
TGTGATGAGCGCGTTGGCACAGATGGAGCGGGAACTGATTGTTGAGCGTACCAAGGCTGGTTTAGCCGCAGCAAGAAGCA
GAGGGCGTATTGGAGGCAGACCACAGTCACTATCTTTTGCACAGAAGCAGGAAGCTCAAAAATTATTGGCGAATGGTCAT
AGCAGAAAACAGTTGGCATTACTGTATGGGGTTTCATTGGCCAGCATCTACAAATATTGTCCAGTTAATCGAAACGCTCA
AACAGACCAAAGTGCCTCCGATGAAAAATGA

Upstream 100 bases:

>100_bases
GTTTCTGTTAAAACAAGGTTTTCTTAAATCATGAATTTAGCTAAAATTTTGACCAAACCAAGCGATTACAAGGCTTACCG
GGTCTGAGAAAGGGTTAAAA

Downstream 100 bases:

>100_bases
CAGTGTATTTCTGTGCTCTGCGTGTAAAAAATGGCTTGCTATTTATCGCCCGTTTTGGCTTCAAATATCGCATGCCGTAT
CAGTAATACCTCGTAGCATT

Product: phage DNA-invertase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MAKIGYMRVSKNDQNTDLQQKSLICANCEQIFEDKISGKTDQRPGLKRALNCLKSGDTLVVWKLDRLGRSIKHLITLISK
LEDEGIHFHSLTDAIDTSTSAGRFFFHVMSALAQMERELIVERTKAGLAAARSRGRIGGRPQSLSFAQKQEAQKLLANGH
SRKQLALLYGVSLASIYKYCPVNRNAQTDQSASDEK

Sequences:

>Translated_196_residues
MAKIGYMRVSKNDQNTDLQQKSLICANCEQIFEDKISGKTDQRPGLKRALNCLKSGDTLVVWKLDRLGRSIKHLITLISK
LEDEGIHFHSLTDAIDTSTSAGRFFFHVMSALAQMERELIVERTKAGLAAARSRGRIGGRPQSLSFAQKQEAQKLLANGH
SRKQLALLYGVSLASIYKYCPVNRNAQTDQSASDEK
>Mature_195_residues
AKIGYMRVSKNDQNTDLQQKSLICANCEQIFEDKISGKTDQRPGLKRALNCLKSGDTLVVWKLDRLGRSIKHLITLISKL
EDEGIHFHSLTDAIDTSTSAGRFFFHVMSALAQMERELIVERTKAGLAAARSRGRIGGRPQSLSFAQKQEAQKLLANGHS
RKQLALLYGVSLASIYKYCPVNRNAQTDQSASDEK

Specific function: A DNA fragment of approximately 900 base pairs, adjacent to the fljB (H2) gene, which specifies the synthesis of phase-2 flagellin, can exist in either orientation with respect to fljB. The orientation of the inversion region controls expression of fljB.

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

Organism=Escherichia coli, GI1787404, Length=178, Percent_Identity=62.3595505617977, Blast_Score=239, Evalue=1e-64,
Organism=Escherichia coli, GI1787638, Length=186, Percent_Identity=36.5591397849462, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1787827, Length=186, Percent_Identity=36.5591397849462, Blast_Score=105, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 21824; Mature: 21693

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS00398 RECOMBINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIGYMRVSKNDQNTDLQQKSLICANCEQIFEDKISGKTDQRPGLKRALNCLKSGDTLV
CCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEE
VWKLDRLGRSIKHLITLISKLEDEGIHFHSLTDAIDTSTSAGRFFFHVMSALAQMERELI
EEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VERTKAGLAAARSRGRIGGRPQSLSFAQKQEAQKLLANGHSRKQLALLYGVSLASIYKYC
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
PVNRNAQTDQSASDEK
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKIGYMRVSKNDQNTDLQQKSLICANCEQIFEDKISGKTDQRPGLKRALNCLKSGDTLV
CCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEE
VWKLDRLGRSIKHLITLISKLEDEGIHFHSLTDAIDTSTSAGRFFFHVMSALAQMERELI
EEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VERTKAGLAAARSRGRIGGRPQSLSFAQKQEAQKLLANGHSRKQLALLYGVSLASIYKYC
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
PVNRNAQTDQSASDEK
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8423149 [H]