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The map label for this gene is rpmJ

Identifier: 85058661

GI number: 85058661

Start: 1155621

End: 1155761

Strand: Reverse

Name: rpmJ

Synonym: SG0683

Alternate gene names: 85058661

Gene position: 1155761-1155621 (Counterclockwise)

Preceding gene: 85058662

Following gene: 85058660

Centisome position: 27.71

GC content: 52.48

Gene sequence:

>141_bases
ATGAAGGTATTAAGTTCACTTGCGAGCGCCAAAACGCGTTATCCTGATTGTCAGGTGGTCCGCCGCCGCGGGCGTGTGTA
CGTAATTTGCAAATCCAATCCGCGCTTTAAGGCGGTTCAGGGACGCAAAAAACGCCGCTAA

Upstream 100 bases:

>100_bases
AAAGAGCGCACGGTAGCCAAAGACGGCAGCACCGCACGTTTCAACCAACGCTTTGGCCGTTTCCTCGATCAACCGTCATA
ATCCACAGGACAACTTTAAG

Downstream 100 bases:

>100_bases
CTTTGCAAGAGAGGCTCATCGGGGCCAAGAGAGAAAGTCAGCGCATCGCTACGCCGGGAGAAATACCTTCAGCGCTTTTT
ATTTGCCGCCGTCAGACAGC

Product: 50S ribosomal protein L36

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 46; Mature: 46

Protein sequence:

>46_residues
MKVLSSLASAKTRYPDCQVVRRRGRVYVICKSNPRFKAVQGRKKRR

Sequences:

>Translated_46_residues
MKVLSSLASAKTRYPDCQVVRRRGRVYVICKSNPRFKAVQGRKKRR
>Mature_46_residues
MKVLSSLASAKTRYPDCQVVRRRGRVYVICKSNPRFKAVQGRKKRR

Specific function: Unknown

COG id: COG0257

COG function: function code J; Ribosomal protein L36

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L36P family

Homologues:

Organism=Escherichia coli, GI87081713, Length=46, Percent_Identity=78.2608695652174, Blast_Score=80, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL361_SODGM (Q2NV67)

Other databases:

- EMBL:   AP008232
- RefSeq:   YP_454363.1
- ProteinModelPortal:   Q2NV67
- SMR:   Q2NV67
- STRING:   Q2NV67
- GeneID:   3868150
- GenomeReviews:   AP008232_GR
- KEGG:   sgl:SG0683
- NMPDR:   fig|343509.6.peg.1484
- eggNOG:   COG0257
- HOGENOM:   HBG734088
- ProtClustDB:   PRK00831
- BioCyc:   SGLO343509:SG0683-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00251
- InterPro:   IPR000473
- PANTHER:   PTHR18804
- TIGRFAMs:   TIGR01022

Pfam domain/function: PF00444 Ribosomal_L36; SSF57840 Ribosomal_L36

EC number: NA

Molecular weight: Translated: 5395; Mature: 5395

Theoretical pI: Translated: 12.25; Mature: 12.25

Prosite motif: PS00828 RIBOSOMAL_L36

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLSSLASAKTRYPDCQVVRRRGRVYVICKSNPRFKAVQGRKKRR
CHHHHHHHHHCCCCCCHHHHHHCCCEEEEECCCCCEECCCCCCCCC
>Mature Secondary Structure
MKVLSSLASAKTRYPDCQVVRRRGRVYVICKSNPRFKAVQGRKKRR
CHHHHHHHHHCCCCCCHHHHHHCCCEEEEECCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA