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The map label for this gene is ymoA [H]

Identifier: 85058659

GI number: 85058659

Start: 1154495

End: 1154698

Strand: Reverse

Name: ymoA [H]

Synonym: SG0681

Alternate gene names: 85058659

Gene position: 1154698-1154495 (Counterclockwise)

Preceding gene: 85058660

Following gene: 85058654

Centisome position: 27.68

GC content: 44.61

Gene sequence:

>204_bases
ATGAAAAAGATCGACTATTTAATGCGCTTGAGGAAGTGCAGAACGCTGGAAACCCTTGAGCGTGTGATTGAAAAAAACAA
ATATGAACTGTCCGATGACGAGCTAGAGATATTCAATTCCGCCGCCGATCATCGTCTGGCGGAACTGACGATGAACAAGC
TATACGACAAAGTACCGGTTTCCGTCTGGAAGTATGTACGCTAA

Upstream 100 bases:

>100_bases
AGCCGCAGGCGTTTATTCGGAACATTCTCGGAGACAGAGCTCTGTACAACCTGAGAAAGTAAGCACATCCCCGTTCAACT
GACTGTACGAAAAGGTAAAA

Downstream 100 bases:

>100_bases
AACTGATTATTCTAAATATAATGTTGGTGTTAATAAACATGACTATTAATACCTTTTTTACCCGCCGGCAATTAAATTAC
CTATTGCCCGCTCCTGCTGA

Product: hemolysin expression-modulating protein

Products: NA

Alternate protein names: Histone-like protein [H]

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MKKIDYLMRLRKCRTLETLERVIEKNKYELSDDELEIFNSAADHRLAELTMNKLYDKVPVSVWKYVR

Sequences:

>Translated_67_residues
MKKIDYLMRLRKCRTLETLERVIEKNKYELSDDELEIFNSAADHRLAELTMNKLYDKVPVSVWKYVR
>Mature_67_residues
MKKIDYLMRLRKCRTLETLERVIEKNKYELSDDELEIFNSAADHRLAELTMNKLYDKVPVSVWKYVR

Specific function: Modulates the thermoregulation of virF, and hence the yop regulon, as well as the expression of the enterotoxin gene yst. It is supposed to be involved in chromosome structure and DNA topology; probably by means of compaction of DNA [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hha/ymoA/cnu family [H]

Homologues:

Organism=Escherichia coli, GI1786665, Length=67, Percent_Identity=77.6119402985075, Blast_Score=115, Evalue=8e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007985 [H]

Pfam domain/function: PF05321 HHA [H]

EC number: NA

Molecular weight: Translated: 8151; Mature: 8151

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIDYLMRLRKCRTLETLERVIEKNKYELSDDELEIFNSAADHRLAELTMNKLYDKVPV
CCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVWKYVR
HHHHHCC
>Mature Secondary Structure
MKKIDYLMRLRKCRTLETLERVIEKNKYELSDDELEIFNSAADHRLAELTMNKLYDKVPV
CCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVWKYVR
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1956283; 1484495 [H]