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The map label for this gene is cyoA [H]

Identifier: 85058645

GI number: 85058645

Start: 1130587

End: 1131516

Strand: Reverse

Name: cyoA [H]

Synonym: SG0667

Alternate gene names: 85058645

Gene position: 1131516-1130587 (Counterclockwise)

Preceding gene: 85058646

Following gene: 85058644

Centisome position: 27.13

GC content: 52.58

Gene sequence:

>930_bases
ATGAGACTCAGGAAATACAATAAATATTTAGGGATGTTGTCGCTGTTTAGCGTCGCCGCCTTAGTTAGCGGCTGCAGTGA
CATGGTGTTAATGAATCCCAAGGGACAGATTGGACTGGAGCAACGTTCATTAATACTGACCGCCTTCGGGCTGATGTTGA
TCGTCGTGATACCCGCTGTCGTCATGGCATTCGTCTTTGCCATTAAATATCGCGCATCCAATACCAAGGCAACGTACAGC
CCCAACTGGTCCCACTCCAGCAAGGTGGAACTGGTAGTGTGGACGGTACCCATCCTTATCATCATTTTCCTGGCCACCCT
GACCTGGAAGTCGACCCATGCGCTGGATCCGAGCAAACCCATTGTCTCAGACGCCAAACCTGTCACCATTCAAGTTGTCG
CCATGGACTGGAAATGGCTGTTCATTTACCCGGAGCAAGGCATCGCTACGGTAAACGAAATCGCTTTCCCGGCCAACGTA
CCGGTGAAATTCGATATTACCTCCAATTCGGTCATGAATTCCTTCTTTATTCCCCAGTTGGGCGGCCAGATTTATGCCAT
GGCCGGTATGAATGCCACCCTGCATCTCATTGCCAACGAGCCGGGCAGCTATAAAGGCATTTCAGCGAACTTCAGCGGCC
GGGGCTTTTCCGGTATGAAATTCACCGCCGTCGCCACGCCGGATCAAGCCGGTTTCGACCAGTGGGTTCAGAAGGTCAAG
GCATCACCGGAAACGCTTGGCACCATGCAGGCTTACGAGCAGCTGGCGGCGCCGAGCGAGTATCATCCGGTTGAGTACTT
CTCCAGCGTTAAACCCAGTCTGTACCAGGATGTGATCGGCAAATTCATGGGCAAGGGGACGAGTATTGCCACCACCCAGG
ACGAAGGGATGTACATGGGTGAACACTCTCACACGGGTACAGAGGAATAA

Upstream 100 bases:

>100_bases
TTCTGACATAAGCTTAAGCGTGTTTACAGTACTGCAACCTTCCCGTAAAATGCCCACACACAAGAAACGACATTAGAGCA
CATTTTATTGAGGTCGTTAA

Downstream 100 bases:

>100_bases
TAACGATGTTCGGAAAATTAACGCTTGATTCGGTTCCGTACCATGAACCGATCATTATGATAACCGTCGCCGCCATCATT
GTGATTGGTCTGGGGCTGGT

Product: cytochrome o ubiquinol oxidase subunit II

Products: NA

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Ubiquinol oxidase chain B; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MRLRKYNKYLGMLSLFSVAALVSGCSDMVLMNPKGQIGLEQRSLILTAFGLMLIVVIPAVVMAFVFAIKYRASNTKATYS
PNWSHSSKVELVVWTVPILIIIFLATLTWKSTHALDPSKPIVSDAKPVTIQVVAMDWKWLFIYPEQGIATVNEIAFPANV
PVKFDITSNSVMNSFFIPQLGGQIYAMAGMNATLHLIANEPGSYKGISANFSGRGFSGMKFTAVATPDQAGFDQWVQKVK
ASPETLGTMQAYEQLAAPSEYHPVEYFSSVKPSLYQDVIGKFMGKGTSIATTQDEGMYMGEHSHTGTEE

Sequences:

>Translated_309_residues
MRLRKYNKYLGMLSLFSVAALVSGCSDMVLMNPKGQIGLEQRSLILTAFGLMLIVVIPAVVMAFVFAIKYRASNTKATYS
PNWSHSSKVELVVWTVPILIIIFLATLTWKSTHALDPSKPIVSDAKPVTIQVVAMDWKWLFIYPEQGIATVNEIAFPANV
PVKFDITSNSVMNSFFIPQLGGQIYAMAGMNATLHLIANEPGSYKGISANFSGRGFSGMKFTAVATPDQAGFDQWVQKVK
ASPETLGTMQAYEQLAAPSEYHPVEYFSSVKPSLYQDVIGKFMGKGTSIATTQDEGMYMGEHSHTGTEE
>Mature_309_residues
MRLRKYNKYLGMLSLFSVAALVSGCSDMVLMNPKGQIGLEQRSLILTAFGLMLIVVIPAVVMAFVFAIKYRASNTKATYS
PNWSHSSKVELVVWTVPILIIIFLATLTWKSTHALDPSKPIVSDAKPVTIQVVAMDWKWLFIYPEQGIATVNEIAFPANV
PVKFDITSNSVMNSFFIPQLGGQIYAMAGMNATLHLIANEPGSYKGISANFSGRGFSGMKFTAVATPDQAGFDQWVQKVK
ASPETLGTMQAYEQLAAPSEYHPVEYFSSVKPSLYQDVIGKFMGKGTSIATTQDEGMYMGEHSHTGTEE

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=309, Percent_Identity=73.1391585760518, Blast_Score=462, Evalue=1e-131,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 33892; Mature: 33892

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRKYNKYLGMLSLFSVAALVSGCSDMVLMNPKGQIGLEQRSLILTAFGLMLIVVIPAV
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VMAFVFAIKYRASNTKATYSPNWSHSSKVELVVWTVPILIIIFLATLTWKSTHALDPSKP
HHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCC
IVSDAKPVTIQVVAMDWKWLFIYPEQGIATVNEIAFPANVPVKFDITSNSVMNSFFIPQL
CCCCCCCEEEEEEEEEEEEEEEECCCCCCCHHHCCCCCCCCEEEEECCCHHHHHHCCCCC
GGQIYAMAGMNATLHLIANEPGSYKGISANFSGRGFSGMKFTAVATPDQAGFDQWVQKVK
CCEEEEEECCCEEEEEEECCCCCCCCEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHH
ASPETLGTMQAYEQLAAPSEYHPVEYFSSVKPSLYQDVIGKFMGKGTSIATTQDEGMYMG
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCEEEC
EHSHTGTEE
CCCCCCCCC
>Mature Secondary Structure
MRLRKYNKYLGMLSLFSVAALVSGCSDMVLMNPKGQIGLEQRSLILTAFGLMLIVVIPAV
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VMAFVFAIKYRASNTKATYSPNWSHSSKVELVVWTVPILIIIFLATLTWKSTHALDPSKP
HHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCC
IVSDAKPVTIQVVAMDWKWLFIYPEQGIATVNEIAFPANVPVKFDITSNSVMNSFFIPQL
CCCCCCCEEEEEEEEEEEEEEEECCCCCCCHHHCCCCCCCCEEEEECCCHHHHHHCCCCC
GGQIYAMAGMNATLHLIANEPGSYKGISANFSGRGFSGMKFTAVATPDQAGFDQWVQKVK
CCEEEEEECCCEEEEEEECCCCCCCCEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHH
ASPETLGTMQAYEQLAAPSEYHPVEYFSSVKPSLYQDVIGKFMGKGTSIATTQDEGMYMG
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCEEEC
EHSHTGTEE
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]