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The map label for this gene is amiD [H]

Identifier: 85058621

GI number: 85058621

Start: 1105182

End: 1105787

Strand: Reverse

Name: amiD [H]

Synonym: SG0643

Alternate gene names: 85058621

Gene position: 1105787-1105182 (Counterclockwise)

Preceding gene: 85058622

Following gene: 85058620

Centisome position: 26.51

GC content: 51.98

Gene sequence:

>606_bases
ATGTATCCCATAGATGCGACAAGTTACCGTTCGGTGAAAGGATTCAATTCACGCGTACGCTTTTTAATCATGCATTATAC
CGCGGTTGATTTCGCCGGCTCGGTCAGGGCGCTGAGCAGCGACGCGGCATTCAGCGCGTGGGCGGGGCGCAACAATCTCA
ACGATACCTCTATTGGCATTGAAAATGTAAATCTGGCATCGGTCAAAAACGGGAAATTGATCTTTCCGCCCTATCATCCG
GTGCAAATTGCGGCCATCATTCAATTAGCGCAGGATATCCTGCAACGGTATCCGGATATTACCCCAACTCAGATTATCGG
CCACAGCGATGTGGCACCCGGGCGAAAATTTGACCCCGGCGCGGCGTTTCCCTGGCAAACATTGTTTACTGCGGGCATAG
GCGCCTGGTTCGACGAGGCGACCAAACAGTATTACCTTGACGAATTTGCTGGGCAGGGCCTACCTGATCAAGCGGCGATT
ATCGGTAAACTGAAAGCCTATGGATATAATACCTCCGGGGCGACAGATGCCAGCGTCTATAAAAATCTTATCCAGGCTTT
TCCAACTGCATTTCCGCCCCGCCGACTGGCAGGGCACAGTGGATAA

Upstream 100 bases:

>100_bases
CGCAATGTCCCTGCAATGGCACAACGGTCCTGGATTGCCGGCGGTGGCCACGGGTATGAATGAAAGGAGGACAATTTTCA
GACAGGAGTCAACGTTGACC

Downstream 100 bases:

>100_bases
TGAGACGGCGGCGATTCTGTATGCACTGGTGAAGAAATATTTTAACAAATAATTGCCGCCCATCAAGACACCATCGGCCC
CGGCCTTCAACGGCGTATTC

Product: putative N-acetylmuramoyl-L-alanine amidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MYPIDATSYRSVKGFNSRVRFLIMHYTAVDFAGSVRALSSDAAFSAWAGRNNLNDTSIGIENVNLASVKNGKLIFPPYHP
VQIAAIIQLAQDILQRYPDITPTQIIGHSDVAPGRKFDPGAAFPWQTLFTAGIGAWFDEATKQYYLDEFAGQGLPDQAAI
IGKLKAYGYNTSGATDASVYKNLIQAFPTAFPPRRLAGHSG

Sequences:

>Translated_201_residues
MYPIDATSYRSVKGFNSRVRFLIMHYTAVDFAGSVRALSSDAAFSAWAGRNNLNDTSIGIENVNLASVKNGKLIFPPYHP
VQIAAIIQLAQDILQRYPDITPTQIIGHSDVAPGRKFDPGAAFPWQTLFTAGIGAWFDEATKQYYLDEFAGQGLPDQAAI
IGKLKAYGYNTSGATDASVYKNLIQAFPTAFPPRRLAGHSG
>Mature_201_residues
MYPIDATSYRSVKGFNSRVRFLIMHYTAVDFAGSVRALSSDAAFSAWAGRNNLNDTSIGIENVNLASVKNGKLIFPPYHP
VQIAAIIQLAQDILQRYPDITPTQIIGHSDVAPGRKFDPGAAFPWQTLFTAGIGAWFDEATKQYYLDEFAGQGLPDQAAI
IGKLKAYGYNTSGATDASVYKNLIQAFPTAFPPRRLAGHSG

Specific function: Unknown

COG id: COG3023

COG function: function code V; Negative regulator of beta-lactamase expression

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acetylmuramoyl-L-alanine amidase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787092, Length=220, Percent_Identity=35, Blast_Score=120, Evalue=6e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002502
- InterPro:   IPR002477 [H]

Pfam domain/function: PF01510 Amidase_2 [H]

EC number: =3.5.1.28 [H]

Molecular weight: Translated: 21863; Mature: 21863

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYPIDATSYRSVKGFNSRVRFLIMHYTAVDFAGSVRALSSDAAFSAWAGRNNLNDTSIGI
CCCCCCCCCCHHHCCCHHHEEHHHHHHHHHHCCHHHHHCCCCHHHHHCCCCCCCCCCCCC
ENVNLASVKNGKLIFPPYHPVQIAAIIQLAQDILQRYPDITPTQIIGHSDVAPGRKFDPG
CCCEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCCCCCC
AAFPWQTLFTAGIGAWFDEATKQYYLDEFAGQGLPDQAAIIGKLKAYGYNTSGATDASVY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHH
KNLIQAFPTAFPPRRLAGHSG
HHHHHHCCCCCCCHHHCCCCC
>Mature Secondary Structure
MYPIDATSYRSVKGFNSRVRFLIMHYTAVDFAGSVRALSSDAAFSAWAGRNNLNDTSIGI
CCCCCCCCCCHHHCCCHHHEEHHHHHHHHHHCCHHHHHCCCCHHHHHCCCCCCCCCCCCC
ENVNLASVKNGKLIFPPYHPVQIAAIIQLAQDILQRYPDITPTQIIGHSDVAPGRKFDPG
CCCEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCCCCCC
AAFPWQTLFTAGIGAWFDEATKQYYLDEFAGQGLPDQAAIIGKLKAYGYNTSGATDASVY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHH
KNLIQAFPTAFPPRRLAGHSG
HHHHHHCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]