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The map label for this gene is yafV [H]

Identifier: 85058572

GI number: 85058572

Start: 1001278

End: 1002237

Strand: Reverse

Name: yafV [H]

Synonym: SG0594

Alternate gene names: 85058572

Gene position: 1002237-1001278 (Counterclockwise)

Preceding gene: 85058575

Following gene: 85058569

Centisome position: 24.03

GC content: 60.42

Gene sequence:

>960_bases
ATGTCGACTTTAGCGCTTAGCCTGTTGCAGCCGCCGCTGGTGTGGATGGACGGCGAGGCAAATCTGGCACACTTTGACCG
CCTGCTGGCGCCGCTCATTGATCAAGATCTGATTCTCCTGCCGGAAATATTTACTACCGGTTTCTCCATGGAAGCGGCAG
GCAACGCCCTGCCCGAGCAGCGGGTAGTGGCATGGCTTGGGGATTGGGCCCAGCGCCCTGGCGCAATGGTAGGTGGCAGC
GCGGCCATCGCCACGCCCGCGGGGGCGGTCAACCGTTTCTTGTTGGTGCAGCCCAACGGCGTGACGCACCGCTATGATAA
GCGTCATCTGTTCAGAATGGCCTACGAGCATCACCATTATCAGGCCGGCCAGGAACGGGTGGTGGTAGGCTGGCGGATAT
TGCCGCTGGTCTGTTATGACCTGCGCTTTCCGCTGTGGTCGCGCAATCGGCAGGACTACGATCTGGCGCTGTACGTCGCT
AATTGGCCAGCGGCGCGCGCCATCAAAAATCAGGCTTATGTCGCCGGCTGCAATCGCGTTGGCGACGATGGCAATCGGCA
CCACTATAGCGGTAACAGCCTGATCCTGGATCCCATGGGAACGGTGCTGGCACAGGCCGAGCCGGACGCGGCAACCTGCC
TACAGGCTCGCCCGTTACTCACGTCCTGGCCCTTTTCTGCTTTGTTTTCCCAGCCACCAAATGGTCATCCGCGCCTGCGC
TTTGCCAACGGGCATAAGCGAGGACGTCTCGGCACGCGACGCTCTTTGTTACCCGTCCTGCGCCGGATGCGCTTCCTGGT
AGGGATGGTGGGCAATCCAGTGGTCAGCGATATCTTGACGACGGCAAATCCACACCCGTTCGTGCTGTTGGATATAATCC
AGAAAACGTTGCAGCACGCGAAACCGGCCCGGCCGGCCAAATATGCGGCCGTGCATGCCGATGGAAAGCATCTTGGGTGA

Upstream 100 bases:

>100_bases
AGCCGCTATCGGTGTTCTGCGCCGACCCCTTCCCACATAAACTAATCCGCCTGTGCTTCGCTAAAGGCGATCAGACGCTG
GACGCCGCCGCGGAGCGCTT

Downstream 100 bases:

>100_bases
CGTCTCCCCTTCGGCGTAAAGTACGTCGAAACTGTCGCGCAAATAGCTGTAGAACTGGTCGCCGCTGTTAAACCCCTACG
GCGTGGTAAAGCCCATATCG

Product: putative amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MSTLALSLLQPPLVWMDGEANLAHFDRLLAPLIDQDLILLPEIFTTGFSMEAAGNALPEQRVVAWLGDWAQRPGAMVGGS
AAIATPAGAVNRFLLVQPNGVTHRYDKRHLFRMAYEHHHYQAGQERVVVGWRILPLVCYDLRFPLWSRNRQDYDLALYVA
NWPAARAIKNQAYVAGCNRVGDDGNRHHYSGNSLILDPMGTVLAQAEPDAATCLQARPLLTSWPFSALFSQPPNGHPRLR
FANGHKRGRLGTRRSLLPVLRRMRFLVGMVGNPVVSDILTTANPHPFVLLDIIQKTLQHAKPARPAKYAAVHADGKHLG

Sequences:

>Translated_319_residues
MSTLALSLLQPPLVWMDGEANLAHFDRLLAPLIDQDLILLPEIFTTGFSMEAAGNALPEQRVVAWLGDWAQRPGAMVGGS
AAIATPAGAVNRFLLVQPNGVTHRYDKRHLFRMAYEHHHYQAGQERVVVGWRILPLVCYDLRFPLWSRNRQDYDLALYVA
NWPAARAIKNQAYVAGCNRVGDDGNRHHYSGNSLILDPMGTVLAQAEPDAATCLQARPLLTSWPFSALFSQPPNGHPRLR
FANGHKRGRLGTRRSLLPVLRRMRFLVGMVGNPVVSDILTTANPHPFVLLDIIQKTLQHAKPARPAKYAAVHADGKHLG
>Mature_318_residues
STLALSLLQPPLVWMDGEANLAHFDRLLAPLIDQDLILLPEIFTTGFSMEAAGNALPEQRVVAWLGDWAQRPGAMVGGSA
AIATPAGAVNRFLLVQPNGVTHRYDKRHLFRMAYEHHHYQAGQERVVVGWRILPLVCYDLRFPLWSRNRQDYDLALYVAN
WPAARAIKNQAYVAGCNRVGDDGNRHHYSGNSLILDPMGTVLAQAEPDAATCLQARPLLTSWPFSALFSQPPNGHPRLRF
ANGHKRGRLGTRRSLLPVLRRMRFLVGMVGNPVVSDILTTANPHPFVLLDIIQKTLQHAKPARPAKYAAVHADGKHLG

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1786412, Length=231, Percent_Identity=58.8744588744589, Blast_Score=275, Evalue=4e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 3.5.-.- [C]

Molecular weight: Translated: 35394; Mature: 35263

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS50263 CN_HYDROLASE ; PS01227 UPF0012

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLALSLLQPPLVWMDGEANLAHFDRLLAPLIDQDLILLPEIFTTGFSMEAAGNALPEQ
CCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCEEHHHHHHCCCCHHHCCCCCCHH
RVVAWLGDWAQRPGAMVGGSAAIATPAGAVNRFLLVQPNGVTHRYDKRHLFRMAYEHHHY
HHHHHHHHHHHCCCCEECCCCEECCCCHHHCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
QAGQERVVVGWRILPLVCYDLRFPLWSRNRQDYDLALYVANWPAARAIKNQAYVAGCNRV
CCCCCEEEEEHHHHHHHHHHHCCCHHCCCCCCCEEEEEEECCCHHHHHHCCCEEEECCCC
GDDGNRHHYSGNSLILDPMGTVLAQAEPDAATCLQARPLLTSWPFSALFSQPPNGHPRLR
CCCCCCEEECCCEEEECCHHHHHHCCCCCHHHHHHCCCCHHCCCHHHHHCCCCCCCCEEE
FANGHKRGRLGTRRSLLPVLRRMRFLVGMVGNPVVSDILTTANPHPFVLLDIIQKTLQHA
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEHHHHHHHHHHHC
KPARPAKYAAVHADGKHLG
CCCCCCCEEEEECCCCCCC
>Mature Secondary Structure 
STLALSLLQPPLVWMDGEANLAHFDRLLAPLIDQDLILLPEIFTTGFSMEAAGNALPEQ
CCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCEEHHHHHHCCCCHHHCCCCCCHH
RVVAWLGDWAQRPGAMVGGSAAIATPAGAVNRFLLVQPNGVTHRYDKRHLFRMAYEHHHY
HHHHHHHHHHHCCCCEECCCCEECCCCHHHCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
QAGQERVVVGWRILPLVCYDLRFPLWSRNRQDYDLALYVANWPAARAIKNQAYVAGCNRV
CCCCCEEEEEHHHHHHHHHHHCCCHHCCCCCCCEEEEEEECCCHHHHHHCCCEEEECCCC
GDDGNRHHYSGNSLILDPMGTVLAQAEPDAATCLQARPLLTSWPFSALFSQPPNGHPRLR
CCCCCCEEECCCEEEECCHHHHHHCCCCCHHHHHHCCCCHHCCCHHHHHCCCCCCCCEEE
FANGHKRGRLGTRRSLLPVLRRMRFLVGMVGNPVVSDILTTANPHPFVLLDIIQKTLQHA
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEHHHHHHHHHHHC
KPARPAKYAAVHADGKHLG
CCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]