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The map label for this gene is panD

Identifier: 85058464

GI number: 85058464

Start: 844239

End: 844619

Strand: Reverse

Name: panD

Synonym: SG0486

Alternate gene names: 85058464

Gene position: 844619-844239 (Counterclockwise)

Preceding gene: 85058465

Following gene: 85058461

Centisome position: 20.25

GC content: 57.48

Gene sequence:

>381_bases
ATGCAACGCACGATGTTACGAGGCAAGCTACACCGGGTGCACGTCACCCAGGTGGATCTCCATTACGAAGGTTCCTGCGC
TATCGATCAGGACTTTCTGGATGCAGCGGGTATCCTGGAGTATGAAGCGATTGATATTTATAACGTCGACAACGGTCAGC
GCTTCTCTACCTACGCAATTGCCGCCGAACGCGGCTCGCGCATCATCTCGGTCAACGGCGCGGCCGCGCGCTGCGCCTGC
GTCGGCGATTTATTGATTATTTGCGCCTATGTGCAAATGCCGGACGAAGAGGCGCGACATCACGCACCCCGGGTGGCCTA
TTTCGACCAACACAATCAGCTACAGCGCACCGCCAAAGCACTGCCGGTGCAGATGGCCTGA

Upstream 100 bases:

>100_bases
GGCGAGCGGTGGTGTTATTCACCGCCTGGCTGGGTAAGGCCCGGCTGATTGATAATGCGCAAGTGGATCTCATTTCATAA
CGGTTAAAAGGCTTAAGCTC

Downstream 100 bases:

>100_bases
ACCATCCGCGCCAAACCCCACAGGCAGCGTTACCCAGCGGTACGGCGCGCCAAGGGCCGCAGGGAGAGACTGCCTGAGTT
CTGGCACCCGCGGGCCGCGG

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MQRTMLRGKLHRVHVTQVDLHYEGSCAIDQDFLDAAGILEYEAIDIYNVDNGQRFSTYAIAAERGSRIISVNGAAARCAC
VGDLLIICAYVQMPDEEARHHAPRVAYFDQHNQLQRTAKALPVQMA

Sequences:

>Translated_126_residues
MQRTMLRGKLHRVHVTQVDLHYEGSCAIDQDFLDAAGILEYEAIDIYNVDNGQRFSTYAIAAERGSRIISVNGAAARCAC
VGDLLIICAYVQMPDEEARHHAPRVAYFDQHNQLQRTAKALPVQMA
>Mature_126_residues
MQRTMLRGKLHRVHVTQVDLHYEGSCAIDQDFLDAAGILEYEAIDIYNVDNGQRFSTYAIAAERGSRIISVNGAAARCAC
VGDLLIICAYVQMPDEEARHHAPRVAYFDQHNQLQRTAKALPVQMA

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=126, Percent_Identity=76.984126984127, Blast_Score=205, Evalue=8e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_SODGM (Q2NVR4)

Other databases:

- EMBL:   AP008232
- RefSeq:   YP_454166.1
- ProteinModelPortal:   Q2NVR4
- SMR:   Q2NVR4
- STRING:   Q2NVR4
- GeneID:   3868700
- GenomeReviews:   AP008232_GR
- KEGG:   sgl:SG0486
- NMPDR:   fig|343509.6.peg.1092
- eggNOG:   COG0853
- HOGENOM:   HBG302821
- OMA:   LYSKIHR
- PhylomeDB:   Q2NVR4
- ProtClustDB:   PRK05449
- BioCyc:   SGLO343509:SG0486-MONOMER
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 14089; Mature: 14089

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: ACT_SITE 25-25 ACT_SITE 58-58 BINDING 57-57

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRTMLRGKLHRVHVTQVDLHYEGSCAIDQDFLDAAGILEYEAIDIYNVDNGQRFSTYAI
CCCCCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHCCCEEEEEEEEEECCCCCEEEEEEE
AAERGSRIISVNGAAARCACVGDLLIICAYVQMPDEEARHHAPRVAYFDQHNQLQRTAKA
EECCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEECCHHHHHHHHHH
LPVQMA
CCCCCC
>Mature Secondary Structure
MQRTMLRGKLHRVHVTQVDLHYEGSCAIDQDFLDAAGILEYEAIDIYNVDNGQRFSTYAI
CCCCCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHCCCEEEEEEEEEECCCCCEEEEEEE
AAERGSRIISVNGAAARCACVGDLLIICAYVQMPDEEARHHAPRVAYFDQHNQLQRTAKA
EECCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEECCHHHHHHHHHH
LPVQMA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA