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The map label for this gene is ygiB [C]

Identifier: 85058243

GI number: 85058243

Start: 484802

End: 485449

Strand: Reverse

Name: ygiB [C]

Synonym: SG0265

Alternate gene names: 85058243

Gene position: 485449-484802 (Counterclockwise)

Preceding gene: 162382800

Following gene: 85058242

Centisome position: 11.64

GC content: 63.89

Gene sequence:

>648_bases
ATGAAACGCACTAAACAGATTAATCACGCCAGCTTTCGCAAGCATTGGCGCGCTTACCGCATGGCGCCCGTCGCGCTGGC
CGTCGGTGCCGTTTTTGTACTGGCCGGCTGTGAAAAAAGCGACGAAAACGTCTCGCTGTACATGAACAGTGACGACTGCG
CCCGCGCCAATCCTTCCTTAAGCGAACAGTGCACCACCGCTTACAACGCCGCGCAGCAGGAAGCGGTGAAAACCGCGCCC
AAATACGCCTCCCGCGCCGACTGTGTGGCGGAATTCGGTGAAGAACAATGTACCCAGGTCCCGGCCCAGGCCGGCATGGC
GGCGGAGTCTCAGCACAGCGGCAGCATGTGGATGCCGCTGATGGCGGGCTACATGATGGGTCGCATGATGGTCGGCGGCT
ATTCACAGCAGCCGCTGTTCACCTCACTCGCCGCCAACAGTCCGGCGCGCGGCCAGTTTGTCGACGCCAGAGGCCGCAAC
TACGGGGCGTCCACCAGCGGTCGTTCGATGACGGTACCGAAGACCGCCCTGGCGCCGAAACCGGCGACCACGCAGACCAT
CACCCGCGGCGGCTTCGGCGAGACCGTCGCCAAGCAGAACGCCCTGCGCAGCAGCAGCGCTACGCCCCACCGCACCATGG
GCGGCTAA

Upstream 100 bases:

>100_bases
TGCCGGCCGCAAACCTTCCATGCTTCATTTTTCACCGTTTTTCCCCTATTCTACAGTGACTTTCTCTAGGTCGATCTCAT
ATCAATAAAGCAGGATAATA

Downstream 100 bases:

>100_bases
CGGGACATGAAACGAGTCACTATCGACGAACGACCGGACTGGCGGGAAAAAGCCACCGAATACGGCTTTAATTTTCATAC
CCTGTACGGCGAACCCTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MKRTKQINHASFRKHWRAYRMAPVALAVGAVFVLAGCEKSDENVSLYMNSDDCARANPSLSEQCTTAYNAAQQEAVKTAP
KYASRADCVAEFGEEQCTQVPAQAGMAAESQHSGSMWMPLMAGYMMGRMMVGGYSQQPLFTSLAANSPARGQFVDARGRN
YGASTSGRSMTVPKTALAPKPATTQTITRGGFGETVAKQNALRSSSATPHRTMGG

Sequences:

>Translated_215_residues
MKRTKQINHASFRKHWRAYRMAPVALAVGAVFVLAGCEKSDENVSLYMNSDDCARANPSLSEQCTTAYNAAQQEAVKTAP
KYASRADCVAEFGEEQCTQVPAQAGMAAESQHSGSMWMPLMAGYMMGRMMVGGYSQQPLFTSLAANSPARGQFVDARGRN
YGASTSGRSMTVPKTALAPKPATTQTITRGGFGETVAKQNALRSSSATPHRTMGG
>Mature_215_residues
MKRTKQINHASFRKHWRAYRMAPVALAVGAVFVLAGCEKSDENVSLYMNSDDCARANPSLSEQCTTAYNAAQQEAVKTAP
KYASRADCVAEFGEEQCTQVPAQAGMAAESQHSGSMWMPLMAGYMMGRMMVGGYSQQPLFTSLAANSPARGQFVDARGRN
YGASTSGRSMTVPKTALAPKPATTQTITRGGFGETVAKQNALRSSSATPHRTMGG

Specific function: Unknown

COG id: COG5463

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0441 family

Homologues:

Organism=Escherichia coli, GI145693179, Length=223, Percent_Identity=66.8161434977578, Blast_Score=301, Evalue=3e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y265_SODGM (Q2NWD5)

Other databases:

- EMBL:   AP008232
- RefSeq:   YP_453945.1
- STRING:   Q2NWD5
- GeneID:   3867905
- GenomeReviews:   AP008232_GR
- KEGG:   sgl:SG0265
- NMPDR:   fig|343509.6.peg.626
- eggNOG:   COG5463
- HOGENOM:   HBG752366
- OMA:   SPANGQF
- PhylomeDB:   Q2NWD5
- ProtClustDB:   PRK11653
- BioCyc:   SGLO343509:SG0265-MONOMER
- HAMAP:   MF_01188
- InterPro:   IPR009576

Pfam domain/function: PF06693 DUF1190

EC number: NA

Molecular weight: Translated: 22989; Mature: 22989

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTKQINHASFRKHWRAYRMAPVALAVGAVFVLAGCEKSDENVSLYMNSDDCARANPSL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCH
SEQCTTAYNAAQQEAVKTAPKYASRADCVAEFGEEQCTQVPAQAGMAAESQHSGSMWMPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
MAGYMMGRMMVGGYSQQPLFTSLAANSPARGQFVDARGRNYGASTSGRSMTVPKTALAPK
HHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEECCCCCCCCCCCCCCEEECCHHHCCCC
PATTQTITRGGFGETVAKQNALRSSSATPHRTMGG
CCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKRTKQINHASFRKHWRAYRMAPVALAVGAVFVLAGCEKSDENVSLYMNSDDCARANPSL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCH
SEQCTTAYNAAQQEAVKTAPKYASRADCVAEFGEEQCTQVPAQAGMAAESQHSGSMWMPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
MAGYMMGRMMVGGYSQQPLFTSLAANSPARGQFVDARGRNYGASTSGRSMTVPKTALAPK
HHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEECCCCCCCCCCCCCCEEECCHHHCCCC
PATTQTITRGGFGETVAKQNALRSSSATPHRTMGG
CCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA