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The map label for this gene is ygiC [H]

Identifier: 85058242

GI number: 85058242

Start: 483635

End: 484795

Strand: Reverse

Name: ygiC [H]

Synonym: SG0264

Alternate gene names: 85058242

Gene position: 484795-483635 (Counterclockwise)

Preceding gene: 85058243

Following gene: 85058240

Centisome position: 11.62

GC content: 55.99

Gene sequence:

>1161_bases
ATGAAACGAGTCACTATCGACGAACGACCGGACTGGCGGGAAAAAGCCACCGAATACGGCTTTAATTTTCATACCCTGTA
CGGCGAACCCTATTGGTGTGAAGATGCTTACTATCAGTTTACCCTGGCGCAAATCGAGACTCTGGAGGAGGCTACCGCTG
ACCTCCATCAGATGTGTTTGCAGGTAGTGGAAAAGGTCGTGGCCAGCGATGAGCTGATGACCAAATTCCGTATTCCCCGC
CACACCTGGTCGTTCGTGCGCAACGCCTGGCAAACGCGTCAGCCGTCGCTGTATTCGCGCTTGGATCTGGTTTATGACGG
CCAGCATCCGCCCAAACTGCTGGAAAACAATGCCGATACGCCGACCTCGCTGTACGAAGCGGCGTTCTTTCAGTGGATCT
GGCTGGAAGATCAGATTAACGCCGGCAAGCTCCCAACCAATGCCGATCAATACAACAGCCTGCAAGAGAAGCTTATCGCC
CGCTTCGCTGAACTTCAGTCGCAGCACGGTTTTAGCCTGCTGCACCTGGCCTGCTGCCAGGACACCGAAGAAGATCGCGG
CACGGTGCAGTATCTGCAGGATTGCGCCACGGAAGCCGGGTTGCCCAATACGTTTCTTTATATTGAGGAGCTGGGGCTGG
GAGAGAAAGGGCAGTTCACCGATATGCAGGATCAGGTCATTAGCAACCTGTTCAAGCTCTATCCGTGGGAATTCATGCTG
CGCGAGATGTTCTCTACCAAGCTGGAGGATGCCGGCGTGCGCTGGCTTGAGCCGGCCTGGAAATGCATTTTGTCCAACAA
GGCGCTGTTGCCGATGCTCTGGCAGATGTTTCCCGACCATCCCAACCTGCTGCCGGCCTATTTTGCCGAAGACGATTACC
CGCCGATGGACAATTACGTGGTGAAGCCGCTGTTTTCCCGCGAGGGCGCCAACGTGCGCGTCTTCGAGCAGGGACGTGAA
ACCGCACGCGTAGACGGTCCTTACGGCGAGGAAGGCTCGATTGTACAGGCGTTTTGCCCTCTGCCCCGCTTTGGCGACAG
CTACACGGTTATCGGCAGTTGGCTGGTTAACGATGAGCCCTGCGGCATCGGCCTGCGCGAAGACCGGCAAATCATTACCC
AGGATCTCTCCCGCTTTTGTCCCCACATCATTCTTGATTGA

Upstream 100 bases:

>100_bases
GACCATCACCCGCGGCGGCTTCGGCGAGACCGTCGCCAAGCAGAACGCCCTGCGCAGCAGCAGCGCTACGCCCCACCGCA
CCATGGGCGGCTAACGGGAC

Downstream 100 bases:

>100_bases
TTCTGCCTCGGCAGCGCGGTGACGCCGCGCCGCCGTTTTAGCCTACCTGCACCGACAGCATACTGATGTAGCCCAGCGTG
ATACCGTCCACGGGCACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKRVTIDERPDWREKATEYGFNFHTLYGEPYWCEDAYYQFTLAQIETLEEATADLHQMCLQVVEKVVASDELMTKFRIPR
HTWSFVRNAWQTRQPSLYSRLDLVYDGQHPPKLLENNADTPTSLYEAAFFQWIWLEDQINAGKLPTNADQYNSLQEKLIA
RFAELQSQHGFSLLHLACCQDTEEDRGTVQYLQDCATEAGLPNTFLYIEELGLGEKGQFTDMQDQVISNLFKLYPWEFML
REMFSTKLEDAGVRWLEPAWKCILSNKALLPMLWQMFPDHPNLLPAYFAEDDYPPMDNYVVKPLFSREGANVRVFEQGRE
TARVDGPYGEEGSIVQAFCPLPRFGDSYTVIGSWLVNDEPCGIGLREDRQIITQDLSRFCPHIILD

Sequences:

>Translated_386_residues
MKRVTIDERPDWREKATEYGFNFHTLYGEPYWCEDAYYQFTLAQIETLEEATADLHQMCLQVVEKVVASDELMTKFRIPR
HTWSFVRNAWQTRQPSLYSRLDLVYDGQHPPKLLENNADTPTSLYEAAFFQWIWLEDQINAGKLPTNADQYNSLQEKLIA
RFAELQSQHGFSLLHLACCQDTEEDRGTVQYLQDCATEAGLPNTFLYIEELGLGEKGQFTDMQDQVISNLFKLYPWEFML
REMFSTKLEDAGVRWLEPAWKCILSNKALLPMLWQMFPDHPNLLPAYFAEDDYPPMDNYVVKPLFSREGANVRVFEQGRE
TARVDGPYGEEGSIVQAFCPLPRFGDSYTVIGSWLVNDEPCGIGLREDRQIITQDLSRFCPHIILD
>Mature_386_residues
MKRVTIDERPDWREKATEYGFNFHTLYGEPYWCEDAYYQFTLAQIETLEEATADLHQMCLQVVEKVVASDELMTKFRIPR
HTWSFVRNAWQTRQPSLYSRLDLVYDGQHPPKLLENNADTPTSLYEAAFFQWIWLEDQINAGKLPTNADQYNSLQEKLIA
RFAELQSQHGFSLLHLACCQDTEEDRGTVQYLQDCATEAGLPNTFLYIEELGLGEKGQFTDMQDQVISNLFKLYPWEFML
REMFSTKLEDAGVRWLEPAWKCILSNKALLPMLWQMFPDHPNLLPAYFAEDDYPPMDNYVVKPLFSREGANVRVFEQGRE
TARVDGPYGEEGSIVQAFCPLPRFGDSYTVIGSWLVNDEPCGIGLREDRQIITQDLSRFCPHIILD

Specific function: Unknown

COG id: COG0754

COG function: function code E; Glutathionylspermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the N-terminal of E.coli gsp and to E.coli yjfC [H]

Homologues:

Organism=Escherichia coli, GI1789416, Length=386, Percent_Identity=77.979274611399, Blast_Score=657, Evalue=0.0,
Organism=Escherichia coli, GI1790629, Length=389, Percent_Identity=51.6709511568123, Blast_Score=405, Evalue=1e-114,
Organism=Escherichia coli, GI1789361, Length=390, Percent_Identity=25.6410256410256, Blast_Score=128, Evalue=8e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005494
- InterPro:   IPR016185 [H]

Pfam domain/function: PF03738 GSP_synth [H]

EC number: NA

Molecular weight: Translated: 44869; Mature: 44869

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVTIDERPDWREKATEYGFNFHTLYGEPYWCEDAYYQFTLAQIETLEEATADLHQMCL
CCCCCCCCCCCHHHHHHHCCCCEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
QVVEKVVASDELMTKFRIPRHTWSFVRNAWQTRQPSLYSRLDLVYDGQHPPKLLENNADT
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCHHHHCCCCCC
PTSLYEAAFFQWIWLEDQINAGKLPTNADQYNSLQEKLIARFAELQSQHGFSLLHLACCQ
HHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
DTEEDRGTVQYLQDCATEAGLPNTFLYIEELGLGEKGQFTDMQDQVISNLFKLYPWEFML
CCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHH
REMFSTKLEDAGVRWLEPAWKCILSNKALLPMLWQMFPDHPNLLPAYFAEDDYPPMDNYV
HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHH
VKPLFSREGANVRVFEQGRETARVDGPYGEEGSIVQAFCPLPRFGDSYTVIGSWLVNDEP
HCHHHHCCCCCEEEEECCCCCEECCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCC
CGIGLREDRQIITQDLSRFCPHIILD
CCCCCHHHHHHHHHHHHHHCCHHCCC
>Mature Secondary Structure
MKRVTIDERPDWREKATEYGFNFHTLYGEPYWCEDAYYQFTLAQIETLEEATADLHQMCL
CCCCCCCCCCCHHHHHHHCCCCEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
QVVEKVVASDELMTKFRIPRHTWSFVRNAWQTRQPSLYSRLDLVYDGQHPPKLLENNADT
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCHHHHCCCCCC
PTSLYEAAFFQWIWLEDQINAGKLPTNADQYNSLQEKLIARFAELQSQHGFSLLHLACCQ
HHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
DTEEDRGTVQYLQDCATEAGLPNTFLYIEELGLGEKGQFTDMQDQVISNLFKLYPWEFML
CCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHH
REMFSTKLEDAGVRWLEPAWKCILSNKALLPMLWQMFPDHPNLLPAYFAEDDYPPMDNYV
HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHH
VKPLFSREGANVRVFEQGRETARVDGPYGEEGSIVQAFCPLPRFGDSYTVIGSWLVNDEP
HCHHHHCCCCCEEEEECCCCCEECCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCC
CGIGLREDRQIITQDLSRFCPHIILD
CCCCCHHHHHHHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]