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The map label for this gene is yraM [H]

Identifier: 85058203

GI number: 85058203

Start: 408354

End: 410462

Strand: Reverse

Name: yraM [H]

Synonym: SG0226

Alternate gene names: 85058203

Gene position: 410462-408354 (Counterclockwise)

Preceding gene: 85058205

Following gene: 85058202

Centisome position: 9.84

GC content: 60.36

Gene sequence:

>2109_bases
ATGCGGAAATATCCGCTTGTTGGTGTTGATTCATTGTTTCATCCGGATTGCCGATTTAATATTGAGCAACTTGAAAAAAA
CATCACTGGATACAGTATGCTTTACTCTTATGTATTGGTTTTTAAAACAGGACGTCTTCTTCCTGTCGTGCTGGCCTCGT
TGATTCTGGCCGCCTGTACCGCCCAGGGTCCGGAAAGCCAAACCGGCCACGCGGCCATTCCGGCCAACGCCAATGCCGAC
TATTATTTGCAGCAGATGCAGCAAAGTAGCAATGATACCAAGACCGACTACCAATTACTCGCCATTCGCGCGCTGATCAA
AGAAGGGCGCCTGCCACAGGCGCAGCAGCAGCTTGCCGCCCTGCAGCAAATCGACAGCGCCTCCCTCGACGCACCGCAGC
GTCTGCGCTATACCCAAGCGATGATCAATGCCGGCCAAAGCCGGCCTTCGCTGGATCTGGTGCGCGCCTATATAGCCCAA
GCGCCGTTGCTGACCGATCCGGCGGCGCGCCAGCAAAATATCGATAAAACCTGGCAAACGCTGGTATCGCTCCCGTCCCC
TCAGAGCAATCTGGTGATTAACGCCGATGAAAACATACTGCAGGGCTGGCTGGATCTGCTGCGCATATACCAGGACAATC
GCCAGGATCCCACGCTGTTGCAGGCAGCCATCAAAGACTGGCAGACCCGCTATCCGCAAAACCCGGCGGCGAAAACTCTG
CCTACACCGCTCAGTCAGGTGCAAAACTATTCCTCGTCCTCGGTGGGGGGCATTGCTTTGCTGCTGCCGCTTAACGGCCA
GGCCCAGGTTTTCTCCAACGCGATTCAGCAAGGGTTCTCGGCGGCTAAAAACGGCCTGACGACTCAACAAAGCGCGCTGG
AGCAGGACGCGAGCGCCGCAGGCCAGTCCACCGATGGCGTTCCCCAGAACGACGGTACGGCGGGGACAGAGCCGGCCGGC
GGCAGCGCCAATCAGAACGGACCAGTGACCACTCCCGGCACCCGTCCTGACCCCGCTGCATCGGGCGTCGACGGGCAGGC
CTCCGCCGCTGACAATGCGCCCCAGGCAACGACCCTTAGCGGGCAGAGCGCCGGCGGCCAACCGTCGGCAGCGCCCTCCG
CCGCCAGCGGCGTACCGGTCAAGGTTTATGATACGTCAAGCCAGCCGCTGCCAGCTCTGCTGGCGCAGGCGCAGCGGGAC
GGCGCCAGCATGATAATCGGTCCGTTGCTGAAAAATGACGTTGAGCAGCTGTACAACGATAATGCTGTCGCCGCGTCCGC
CGGCACGCTGAATATCCTGGCGCTTAATCAGCCTGAACACCTGCAGCCGCGGCCTAACATCTGTTATTTTGCCCTGTCTC
CGGAAGATGAGGCGCGCGATGCGGCCAACCACATCCACCAGCAGGGTCGGCAGCAACCGCTGCTACTGCTGCCGCGTGGC
GCTCTGGGCGATAGGATAGCGAAAGCGTTTTCCGACGCCTGGCATCAGGCAGGCGGCGCCACGGTACTGGAACAGCGCTT
CGGCTCCTCCGCTGAGCTGAAACAAAACATTAACAGCGGCTCCGGCATCTCGTTGACCGGCACGCCGGTGGCCGCTGGCG
CAGCGGTGACCATCGCGGGCCTGACCATCCCTGTGCCGCAGGATAATGGCGCGGTCTCGCCATCCGGCGGCGCTATCGAC
GCGGTTTATATCATCGCCACCCCTGTTGAACTGGCGCTGATTAAGCCCATGATTGATATGCGCGTCAGTTCGCGCTCCCG
GCTAGCGCTGTATGCCAGTTCGCGCAGCTATCAGGCCGATGCCGGGCCCGATTACAGTCTGGAAATGGAGGGGCTGGAAT
TCAGCGATATCCCGCTGCTGACCGGCGCCCATCCGGCGCTGCTGTCGCAGATCAGTGCCCAGTTCCGCGGCGATTATTCA
CTGGTGCGGCTATACGCCATGGGCATAGATGCCTGGGCGCTGGCTAATCACTTCAGCGAAATGCGGCAGATTCCGGGCTT
CCAGGTAGCGGGCGAAACCGGCACGCTGTCGGCAACGCCGGATTGCGTGATCAACAGGACGTTGTCATGGCTGAAATACC
AGCGTGGCCAAATGATAGCGGCGCAGTAA

Upstream 100 bases:

>100_bases
TCCTCAGCGGCAATAAGATCAACGCCCTGCAGGACAGACAGCGCCCGCCGGGTGATGTCCTCCAGATTACCAATGGGAGT
CGGTACCACATAAAGCGTTG

Downstream 100 bases:

>100_bases
GCGGCCGCTCACGTGGCGCACAGGCGGAGCGGTACGCGCGCTGCCGCCTTGAGCAGGCCGGCCTGCGTTTTGTCGCCGCC
AATATGCGTATCCGCGGCGG

Product: putative glycosylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 702; Mature: 702

Protein sequence:

>702_residues
MRKYPLVGVDSLFHPDCRFNIEQLEKNITGYSMLYSYVLVFKTGRLLPVVLASLILAACTAQGPESQTGHAAIPANANAD
YYLQQMQQSSNDTKTDYQLLAIRALIKEGRLPQAQQQLAALQQIDSASLDAPQRLRYTQAMINAGQSRPSLDLVRAYIAQ
APLLTDPAARQQNIDKTWQTLVSLPSPQSNLVINADENILQGWLDLLRIYQDNRQDPTLLQAAIKDWQTRYPQNPAAKTL
PTPLSQVQNYSSSSVGGIALLLPLNGQAQVFSNAIQQGFSAAKNGLTTQQSALEQDASAAGQSTDGVPQNDGTAGTEPAG
GSANQNGPVTTPGTRPDPAASGVDGQASAADNAPQATTLSGQSAGGQPSAAPSAASGVPVKVYDTSSQPLPALLAQAQRD
GASMIIGPLLKNDVEQLYNDNAVAASAGTLNILALNQPEHLQPRPNICYFALSPEDEARDAANHIHQQGRQQPLLLLPRG
ALGDRIAKAFSDAWHQAGGATVLEQRFGSSAELKQNINSGSGISLTGTPVAAGAAVTIAGLTIPVPQDNGAVSPSGGAID
AVYIIATPVELALIKPMIDMRVSSRSRLALYASSRSYQADAGPDYSLEMEGLEFSDIPLLTGAHPALLSQISAQFRGDYS
LVRLYAMGIDAWALANHFSEMRQIPGFQVAGETGTLSATPDCVINRTLSWLKYQRGQMIAAQ

Sequences:

>Translated_702_residues
MRKYPLVGVDSLFHPDCRFNIEQLEKNITGYSMLYSYVLVFKTGRLLPVVLASLILAACTAQGPESQTGHAAIPANANAD
YYLQQMQQSSNDTKTDYQLLAIRALIKEGRLPQAQQQLAALQQIDSASLDAPQRLRYTQAMINAGQSRPSLDLVRAYIAQ
APLLTDPAARQQNIDKTWQTLVSLPSPQSNLVINADENILQGWLDLLRIYQDNRQDPTLLQAAIKDWQTRYPQNPAAKTL
PTPLSQVQNYSSSSVGGIALLLPLNGQAQVFSNAIQQGFSAAKNGLTTQQSALEQDASAAGQSTDGVPQNDGTAGTEPAG
GSANQNGPVTTPGTRPDPAASGVDGQASAADNAPQATTLSGQSAGGQPSAAPSAASGVPVKVYDTSSQPLPALLAQAQRD
GASMIIGPLLKNDVEQLYNDNAVAASAGTLNILALNQPEHLQPRPNICYFALSPEDEARDAANHIHQQGRQQPLLLLPRG
ALGDRIAKAFSDAWHQAGGATVLEQRFGSSAELKQNINSGSGISLTGTPVAAGAAVTIAGLTIPVPQDNGAVSPSGGAID
AVYIIATPVELALIKPMIDMRVSSRSRLALYASSRSYQADAGPDYSLEMEGLEFSDIPLLTGAHPALLSQISAQFRGDYS
LVRLYAMGIDAWALANHFSEMRQIPGFQVAGETGTLSATPDCVINRTLSWLKYQRGQMIAAQ
>Mature_702_residues
MRKYPLVGVDSLFHPDCRFNIEQLEKNITGYSMLYSYVLVFKTGRLLPVVLASLILAACTAQGPESQTGHAAIPANANAD
YYLQQMQQSSNDTKTDYQLLAIRALIKEGRLPQAQQQLAALQQIDSASLDAPQRLRYTQAMINAGQSRPSLDLVRAYIAQ
APLLTDPAARQQNIDKTWQTLVSLPSPQSNLVINADENILQGWLDLLRIYQDNRQDPTLLQAAIKDWQTRYPQNPAAKTL
PTPLSQVQNYSSSSVGGIALLLPLNGQAQVFSNAIQQGFSAAKNGLTTQQSALEQDASAAGQSTDGVPQNDGTAGTEPAG
GSANQNGPVTTPGTRPDPAASGVDGQASAADNAPQATTLSGQSAGGQPSAAPSAASGVPVKVYDTSSQPLPALLAQAQRD
GASMIIGPLLKNDVEQLYNDNAVAASAGTLNILALNQPEHLQPRPNICYFALSPEDEARDAANHIHQQGRQQPLLLLPRG
ALGDRIAKAFSDAWHQAGGATVLEQRFGSSAELKQNINSGSGISLTGTPVAAGAAVTIAGLTIPVPQDNGAVSPSGGAID
AVYIIATPVELALIKPMIDMRVSSRSRLALYASSRSYQADAGPDYSLEMEGLEFSDIPLLTGAHPALLSQISAQFRGDYS
LVRLYAMGIDAWALANHFSEMRQIPGFQVAGETGTLSATPDCVINRTLSWLKYQRGQMIAAQ

Specific function: Unknown

COG id: COG3107

COG function: function code R; Putative lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1655 [H]

Homologues:

Organism=Escherichia coli, GI1789537, Length=707, Percent_Identity=50.2121640735502, Blast_Score=628, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007443 [H]

Pfam domain/function: PF04348 LppC [H]

EC number: NA

Molecular weight: Translated: 74419; Mature: 74419

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKYPLVGVDSLFHPDCRFNIEQLEKNITGYSMLYSYVLVFKTGRLLPVVLASLILAACT
CCCCCCCCCHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AQGPESQTGHAAIPANANADYYLQQMQQSSNDTKTDYQLLAIRALIKEGRLPQAQQQLAA
CCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH
LQQIDSASLDAPQRLRYTQAMINAGQSRPSLDLVRAYIAQAPLLTDPAARQQNIDKTWQT
HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LVSLPSPQSNLVINADENILQGWLDLLRIYQDNRQDPTLLQAAIKDWQTRYPQNPAAKTL
HHCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
PTPLSQVQNYSSSSVGGIALLLPLNGQAQVFSNAIQQGFSAAKNGLTTQQSALEQDASAA
CCCHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
GQSTDGVPQNDGTAGTEPAGGSANQNGPVTTPGTRPDPAASGVDGQASAADNAPQATTLS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
GQSAGGQPSAAPSAASGVPVKVYDTSSQPLPALLAQAQRDGASMIIGPLLKNDVEQLYND
CCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCC
NAVAASAGTLNILALNQPEHLQPRPNICYFALSPEDEARDAANHIHQQGRQQPLLLLPRG
CCEEECCCEEEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCC
ALGDRIAKAFSDAWHQAGGATVLEQRFGSSAELKQNINSGSGISLTGTPVAAGAAVTIAG
HHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHCCCCCCCEEEECCCCCCCCEEEEEE
LTIPVPQDNGAVSPSGGAIDAVYIIATPVELALIKPMIDMRVSSRSRLALYASSRSYQAD
EEEECCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
AGPDYSLEMEGLEFSDIPLLTGAHPALLSQISAQFRGDYSLVRLYAMGIDAWALANHFSE
CCCCCEEEECCCCCCCCCEECCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHH
MRQIPGFQVAGETGTLSATPDCVINRTLSWLKYQRGQMIAAQ
HHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEECC
>Mature Secondary Structure
MRKYPLVGVDSLFHPDCRFNIEQLEKNITGYSMLYSYVLVFKTGRLLPVVLASLILAACT
CCCCCCCCCHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AQGPESQTGHAAIPANANADYYLQQMQQSSNDTKTDYQLLAIRALIKEGRLPQAQQQLAA
CCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH
LQQIDSASLDAPQRLRYTQAMINAGQSRPSLDLVRAYIAQAPLLTDPAARQQNIDKTWQT
HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LVSLPSPQSNLVINADENILQGWLDLLRIYQDNRQDPTLLQAAIKDWQTRYPQNPAAKTL
HHCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
PTPLSQVQNYSSSSVGGIALLLPLNGQAQVFSNAIQQGFSAAKNGLTTQQSALEQDASAA
CCCHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
GQSTDGVPQNDGTAGTEPAGGSANQNGPVTTPGTRPDPAASGVDGQASAADNAPQATTLS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
GQSAGGQPSAAPSAASGVPVKVYDTSSQPLPALLAQAQRDGASMIIGPLLKNDVEQLYND
CCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCC
NAVAASAGTLNILALNQPEHLQPRPNICYFALSPEDEARDAANHIHQQGRQQPLLLLPRG
CCEEECCCEEEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCC
ALGDRIAKAFSDAWHQAGGATVLEQRFGSSAELKQNINSGSGISLTGTPVAAGAAVTIAG
HHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHCCCCCCCEEEECCCCCCCCEEEEEE
LTIPVPQDNGAVSPSGGAIDAVYIIATPVELALIKPMIDMRVSSRSRLALYASSRSYQAD
EEEECCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
AGPDYSLEMEGLEFSDIPLLTGAHPALLSQISAQFRGDYSLVRLYAMGIDAWALANHFSE
CCCCCEEEECCCCCCCCCEECCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHH
MRQIPGFQVAGETGTLSATPDCVINRTLSWLKYQRGQMIAAQ
HHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]