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The map label for this gene is yhcB [H]

Identifier: 85058192

GI number: 85058192

Start: 392483

End: 392866

Strand: Reverse

Name: yhcB [H]

Synonym: SG0214

Alternate gene names: 85058192

Gene position: 392866-392483 (Counterclockwise)

Preceding gene: 85058201

Following gene: 85058191

Centisome position: 9.42

GC content: 53.65

Gene sequence:

>384_bases
ATGGCCTGGGAATATGCGCTGATCGGATTAGTAGTGGGCATGATTATCGGTGCGGTCGCCATGCGTTTCGGTAACCGTAA
GCTGTGTCAGCAGCAAACGCTTAAGCACGAATTGGAAAAAAGCAAAGCCGAGCTGGACAAGTATCGCGAAGAGTTGACCA
GCCATTTCGCCCGCAGTGCAGAACTGCTGGACAACATGGCCAACGATTACCGTCAGCTCTATCAGCATATGGCCAAGAGT
TCCAATAGTCTGCTGCCGAACCAGCGCAGCGAAGATAATCCGTTCCGCTATCGCCTCACCGAAGCGGAAGCAGACAACGA
CCAAATTCCGGCGGAAATGCAGCCGCGGGATTATCCGGAAAGCGCCAGCGGCTTGCGCAAATAA

Upstream 100 bases:

>100_bases
GTCACATTCTCCGGTTCCACTGATGGCGCGTTACCGGTTATAGTGAAGCTAACTGTGTATTAAACCCTACGGGACAACGA
AGTCAAAAATAGGAGTCATT

Downstream 100 bases:

>100_bases
CGTCCCGCCCCGTGGCTGCGCCGGCATCGGCTCGCCCACAGGCTGAACTTTTCCCCTCCCGGCAGGGTCATAATGGCGAT
TATGATGCCATCACCGGATG

Product: cytochrome d ubiquinol oxidase subunit III

Products: NA

Alternate protein names: Cytochrome bd-I oxidase subunit III [H]

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MAWEYALIGLVVGMIIGAVAMRFGNRKLCQQQTLKHELEKSKAELDKYREELTSHFARSAELLDNMANDYRQLYQHMAKS
SNSLLPNQRSEDNPFRYRLTEAEADNDQIPAEMQPRDYPESASGLRK

Sequences:

>Translated_127_residues
MAWEYALIGLVVGMIIGAVAMRFGNRKLCQQQTLKHELEKSKAELDKYREELTSHFARSAELLDNMANDYRQLYQHMAKS
SNSLLPNQRSEDNPFRYRLTEAEADNDQIPAEMQPRDYPESASGLRK
>Mature_126_residues
AWEYALIGLVVGMIIGAVAMRFGNRKLCQQQTLKHELEKSKAELDKYREELTSHFARSAELLDNMANDYRQLYQHMAKSS
NSLLPNQRSEDNPFRYRLTEAEADNDQIPAEMQPRDYPESASGLRK

Specific function: Unknown

COG id: COG3105

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1628 [H]

Homologues:

Organism=Escherichia coli, GI87082232, Length=125, Percent_Identity=78.4, Blast_Score=186, Evalue=4e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009386 [H]

Pfam domain/function: PF06295 DUF1043 [H]

EC number: NA

Molecular weight: Translated: 14681; Mature: 14550

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWEYALIGLVVGMIIGAVAMRFGNRKLCQQQTLKHELEKSKAELDKYREELTSHFARSA
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLDNMANDYRQLYQHMAKSSNSLLPNQRSEDNPFRYRLTEAEADNDQIPAEMQPRDYPE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC
SASGLRK
CCCCCCC
>Mature Secondary Structure 
AWEYALIGLVVGMIIGAVAMRFGNRKLCQQQTLKHELEKSKAELDKYREELTSHFARSA
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLDNMANDYRQLYQHMAKSSNSLLPNQRSEDNPFRYRLTEAEADNDQIPAEMQPRDYPE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC
SASGLRK
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]