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The map label for this gene is hcpA [H]

Identifier: 85058126

GI number: 85058126

Start: 263569

End: 264048

Strand: Reverse

Name: hcpA [H]

Synonym: SG0148

Alternate gene names: 85058126

Gene position: 264048-263569 (Counterclockwise)

Preceding gene: 85058128

Following gene: 85058125

Centisome position: 6.33

GC content: 42.71

Gene sequence:

>480_bases
ATGGCTATTCCTGCTTACCTGTGGCTGAAAGATGACGGCGGCGCAGATATTAAAGGGTTAGTTGACGTGCGGGATCGAGA
GGGGAGTATTGAAATTCTCAGCTTTATGCATGGCCTGAGCATACCTACCGACAGCCACACAGGAAAACTGACTGGAACAC
GCATTCACAGTGAGATGGAATTTGAAAAAGAGTTCGACTCATCAAGCCCCTACCTATACAAAGCAGTATCTTCAGGGCAG
ACACTCAAAAGTGCTGAAATTAAATGGTATCGCATTAACCATGCTGGACAGGAAGAGGAATATTTTAATATTCTTCTCGA
AGGTGTCATAGTTGTTTCTGTTAACCCCCTGATGCACAACATTAAAAGCATAGAGAATATGAATCATTTGGAATCAATCA
CTTTGCGTTATGCAATAATCACATGGAAATACTGTGACGGAAATATCCAGCATTCAGACTCATGGAAAGAACGCGCCTGA

Upstream 100 bases:

>100_bases
ATTAAATAAACCCCATTATGCATTGATTTAAGTTGAATCTACAATTCCCTGTAGAATGTGTATCGTGTTTTACAACGAAA
ATAATGACAAGGAGTTACCT

Downstream 100 bases:

>100_bases
TACATAAATAAACATGGCGTTACAACGCGCCATTTTAAACAAGGATAACATAGTAACATAGACGTATGATGTAAGAAAAA
AATCCTTTGCGCGTAATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Secreted protein hcp [H]

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MAIPAYLWLKDDGGADIKGLVDVRDREGSIEILSFMHGLSIPTDSHTGKLTGTRIHSEMEFEKEFDSSSPYLYKAVSSGQ
TLKSAEIKWYRINHAGQEEEYFNILLEGVIVVSVNPLMHNIKSIENMNHLESITLRYAIITWKYCDGNIQHSDSWKERA

Sequences:

>Translated_159_residues
MAIPAYLWLKDDGGADIKGLVDVRDREGSIEILSFMHGLSIPTDSHTGKLTGTRIHSEMEFEKEFDSSSPYLYKAVSSGQ
TLKSAEIKWYRINHAGQEEEYFNILLEGVIVVSVNPLMHNIKSIENMNHLESITLRYAIITWKYCDGNIQHSDSWKERA
>Mature_158_residues
AIPAYLWLKDDGGADIKGLVDVRDREGSIEILSFMHGLSIPTDSHTGKLTGTRIHSEMEFEKEFDSSSPYLYKAVSSGQT
LKSAEIKWYRINHAGQEEEYFNILLEGVIVVSVNPLMHNIKSIENMNHLESITLRYAIITWKYCDGNIQHSDSWKERA

Specific function: Unknown

COG id: COG3157

COG function: function code S; Hemolysin-coregulated protein (uncharacterized)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hcp1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017728
- InterPro:   IPR008514 [H]

Pfam domain/function: PF05638 DUF796 [H]

EC number: NA

Molecular weight: Translated: 18120; Mature: 17988

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIPAYLWLKDDGGADIKGLVDVRDREGSIEILSFMHGLSIPTDSHTGKLTGTRIHSEME
CCCCEEEEEECCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCHH
FEKEFDSSSPYLYKAVSSGQTLKSAEIKWYRINHAGQEEEYFNILLEGVIVVSVNPLMHN
HHHHCCCCCCEEEEEECCCCEEECCCEEEEEECCCCCHHHHHHHHHHEEEEEEECHHHHH
IKSIENMNHLESITLRYAIITWKYCDGNIQHSDSWKERA
HHHHHCHHHHHHHEEEEEEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
AIPAYLWLKDDGGADIKGLVDVRDREGSIEILSFMHGLSIPTDSHTGKLTGTRIHSEME
CCCEEEEEECCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCHH
FEKEFDSSSPYLYKAVSSGQTLKSAEIKWYRINHAGQEEEYFNILLEGVIVVSVNPLMHN
HHHHCCCCCCEEEEEECCCCEEECCCEEEEEECCCCCHHHHHHHHHHEEEEEEECHHHHH
IKSIENMNHLESITLRYAIITWKYCDGNIQHSDSWKERA
HHHHHCHHHHHHHEEEEEEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]