| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is kdgK [H]
Identifier: 85058045
GI number: 85058045
Start: 98463
End: 99404
Strand: Reverse
Name: kdgK [H]
Synonym: SG0067
Alternate gene names: 85058045
Gene position: 99404-98463 (Counterclockwise)
Preceding gene: 85058046
Following gene: 85058043
Centisome position: 2.38
GC content: 57.32
Gene sequence:
>942_bases ATGACTAGCAAAAAGATCTCCATTATCGGCGAATGCATGATCGAATTGTCGCAAAAGGGCAGCGACGTTAAGCGCGGATT TGGCGGCGATACGTTAAATACCTCGGTCTATCTCTCGCGCCTGGTCGCAGCCTCGCAGCTTAAGGTGCATTATATTACCG CCCTCGGTACCTACAGCTTTAGCGACGATATGCTGCAGGCCTTGCAACAGGAGGGGGTAGAAACCTCGCTCATCCAGCGC CTGGAAAACCGGTTGCCCGGCCTGTATTACATTGAAACCGACGCCCATGGCGAGCGTACCTTTTATTATTGGCGCAATGA AGCGGCCGCCCGTTACTGGCTGGAAAGCGCGTCGTCGGCTGACATTTGCGCCGCGCTGGCAGACTTTGATTACCTTTATT TAAGCGGGATCAGCATCGCCATCCTTTCGCTGCAAAGCCGTAAGCAGCTACTGGCCCTACTGCGGACCTGCCGTGCCAAT GGCGGAAAAGTCATTTTTGACAATAATTATCGCCTGCGTCTGTGGCAAAGCCGGGAAGAAACCCAGGCGGCCTATCGCGA CATTCTTGCCTGTACCGACATCGCCTTCCTGACGCTCGATGACGAGGACATGATGTGGGGTGAACAGCCGGTGGACGCTG TACTTGAGCGCACGCGTGCGCTGGGCGTCAGTGAAATTGTCATCAAACGCGGCGCCGAGGCCTGTCTGGTAGCGGAAGCG AACGAGGTGGTGCAGGAAGTGCACGCGGTGAAATTGCCAAAAGAGAAAGTGGTCGATACGACCACCGCCGGCGACTCTTT CAGTGCCGGCTATCTGGCTGTTCGACTGACCGGCGGCACCGCAACCGCCGCTGCCCAGAGCGGTCACCGCACCGCTAGTA CGGTGATCCAGTATCACGGCGCCATCATACCGCGTGACGCATGCCGACCCGGAAGGGGCTGA
Upstream 100 bases:
>100_bases TAAAATAAAATAACGTTTCATAATTTCTTGACTGCATCAAACATTCTGTTGAGACTAGGTGCCTATATCAGCTTTCTTAT TTATGACGGGCCAGTAATCA
Downstream 100 bases:
>100_bases CGCCGCCACCGGGGCCGCAGGCTGACCGGCGACGCGGAGGTGGCCTCCTCTATCACGAGGCTGGCGGTATGTCGGTGACT TCCGGCTTGCTCTCGTCGAT
Product: ketodeoxygluconokinase
Products: NA
Alternate protein names: 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase [H]
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MTSKKISIIGECMIELSQKGSDVKRGFGGDTLNTSVYLSRLVAASQLKVHYITALGTYSFSDDMLQALQQEGVETSLIQR LENRLPGLYYIETDAHGERTFYYWRNEAAARYWLESASSADICAALADFDYLYLSGISIAILSLQSRKQLLALLRTCRAN GGKVIFDNNYRLRLWQSREETQAAYRDILACTDIAFLTLDDEDMMWGEQPVDAVLERTRALGVSEIVIKRGAEACLVAEA NEVVQEVHAVKLPKEKVVDTTTAGDSFSAGYLAVRLTGGTATAAAQSGHRTASTVIQYHGAIIPRDACRPGRG
Sequences:
>Translated_313_residues MTSKKISIIGECMIELSQKGSDVKRGFGGDTLNTSVYLSRLVAASQLKVHYITALGTYSFSDDMLQALQQEGVETSLIQR LENRLPGLYYIETDAHGERTFYYWRNEAAARYWLESASSADICAALADFDYLYLSGISIAILSLQSRKQLLALLRTCRAN GGKVIFDNNYRLRLWQSREETQAAYRDILACTDIAFLTLDDEDMMWGEQPVDAVLERTRALGVSEIVIKRGAEACLVAEA NEVVQEVHAVKLPKEKVVDTTTAGDSFSAGYLAVRLTGGTATAAAQSGHRTASTVIQYHGAIIPRDACRPGRG >Mature_312_residues TSKKISIIGECMIELSQKGSDVKRGFGGDTLNTSVYLSRLVAASQLKVHYITALGTYSFSDDMLQALQQEGVETSLIQRL ENRLPGLYYIETDAHGERTFYYWRNEAAARYWLESASSADICAALADFDYLYLSGISIAILSLQSRKQLLALLRTCRANG GKVIFDNNYRLRLWQSREETQAAYRDILACTDIAFLTLDDEDMMWGEQPVDAVLERTRALGVSEIVIKRGAEACLVAEAN EVVQEVHAVKLPKEKVVDTTTAGDSFSAGYLAVRLTGGTATAAAQSGHRTASTVIQYHGAIIPRDACRPGRG
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI87082281, Length=305, Percent_Identity=72.7868852459016, Blast_Score=463, Evalue=1e-132,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.45 [H]
Molecular weight: Translated: 34452; Mature: 34321
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKKISIIGECMIELSQKGSDVKRGFGGDTLNTSVYLSRLVAASQLKVHYITALGTYSF CCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEEECCCC SDDMLQALQQEGVETSLIQRLENRLPGLYYIETDAHGERTFYYWRNEAAARYWLESASSA CHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCHHHHHHHHCCCCC DICAALADFDYLYLSGISIAILSLQSRKQLLALLRTCRANGGKVIFDNNYRLRLWQSREE HHHHHHHHCCHHHHCCHHHEEEEHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCHHH TQAAYRDILACTDIAFLTLDDEDMMWGEQPVDAVLERTRALGVSEIVIKRGAEACLVAEA HHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCEEEEECH NEVVQEVHAVKLPKEKVVDTTTAGDSFSAGYLAVRLTGGTATAAAQSGHRTASTVIQYHG HHHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHCCCHHHHHHHHHCC AIIPRDACRPGRG CCCCHHCCCCCCC >Mature Secondary Structure TSKKISIIGECMIELSQKGSDVKRGFGGDTLNTSVYLSRLVAASQLKVHYITALGTYSF CCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEEECCCC SDDMLQALQQEGVETSLIQRLENRLPGLYYIETDAHGERTFYYWRNEAAARYWLESASSA CHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCHHHHHHHHCCCCC DICAALADFDYLYLSGISIAILSLQSRKQLLALLRTCRANGGKVIFDNNYRLRLWQSREE HHHHHHHHCCHHHHCCHHHEEEEHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCHHH TQAAYRDILACTDIAFLTLDDEDMMWGEQPVDAVLERTRALGVSEIVIKRGAEACLVAEA HHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCEEEEECH NEVVQEVHAVKLPKEKVVDTTTAGDSFSAGYLAVRLTGGTATAAAQSGHRTASTVIQYHG HHHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHCCCHHHHHHHHHCC AIIPRDACRPGRG CCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]