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The map label for this gene is fliP

Identifier: 85058021

GI number: 85058021

Start: 61695

End: 62465

Strand: Reverse

Name: fliP

Synonym: SG0043

Alternate gene names: 85058021

Gene position: 62465-61695 (Counterclockwise)

Preceding gene: 85058022

Following gene: 85058020

Centisome position: 1.5

GC content: 58.11

Gene sequence:

>771_bases
ATGCGGCGCGGGCCGGCTCGCGGCGTGTGGCCGCTTGTGCTGCTGGCGCTGCCGTTACTGATAATACTACTGCCTTTTCA
GGCCGCCCACGCCGCACAGCAGGGGCTCATACAGATGCATCCCCTACCCGACGGCGGCCAGCGCTGGTCGCTGCCGGTAC
AAACGCTGGTATTGCTGACCTCGCTCACTTTTTTACCGGCGGCGCTGCTGCTGATGTCGGGATTTACCCGCATCATTATC
GTGCTGAGTATCCTGCGCAATGCGCTGGGCACGCCCTCCGCCCCGCCCAATCAGATTTTGCTCGGGCTAGCATTATGTCT
GACCTTTTTTGTGATGTCGCCGGTGCTGGACAGTATTTACCGCGATGCCTACCTGCCATTTTCCCAGGACCAGATTGATA
TGGACACGGCAATAGAGCGGGCGGCGCAGCCGCTGCGCCAGTTTATGCTGACCCAAACGCGGGAAACGGATTTATCGCTT
TACGCCCGCCTGGGCAAACAGGCGGCGTTCGCCGGTCCTGAGCAGGTGCCGATGCAAATCCTGCTGCCGGCATTTGTCAC
CAGCGAACTCAAAACCGCCTTTCAGATCGGTTTCACGCTGTTTATTCCGTTTTTGATTATCGATTTGGTCATCGCCAGCG
TCCTGATGGCGCTGGGCATGATGATGCTACCGCCTACGACGGTATCGCTGCCGTTCAAACTCATGCTGTTCGTGATGGTG
GACGGCTGGCAACTCTTGCTGGGGTCACTCGCCCAAAGCTTTTTCAGTTAA

Upstream 100 bases:

>100_bases
CGCCCGACGAGCCGCCGCCAACGTTCCGGACGCTGCTCGCGCGCGAGCGCCAATCGCGGGAGACGACATGAGCATGCCGA
TTCAGCGTGCTCCGCGCGGC

Downstream 100 bases:

>100_bases
CCGATACGAGGCCGTGCCATGACGCCGGAAGCCGTAATGACGCTGGGTTTTGACGCAATGAAAGTCGGGTTGGCGCTCTC
CACGCCTCCGCTATTGGCCG

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MRRGPARGVWPLVLLALPLLIILLPFQAAHAAQQGLIQMHPLPDGGQRWSLPVQTLVLLTSLTFLPAALLLMSGFTRIII
VLSILRNALGTPSAPPNQILLGLALCLTFFVMSPVLDSIYRDAYLPFSQDQIDMDTAIERAAQPLRQFMLTQTRETDLSL
YARLGKQAAFAGPEQVPMQILLPAFVTSELKTAFQIGFTLFIPFLIIDLVIASVLMALGMMMLPPTTVSLPFKLMLFVMV
DGWQLLLGSLAQSFFS

Sequences:

>Translated_256_residues
MRRGPARGVWPLVLLALPLLIILLPFQAAHAAQQGLIQMHPLPDGGQRWSLPVQTLVLLTSLTFLPAALLLMSGFTRIII
VLSILRNALGTPSAPPNQILLGLALCLTFFVMSPVLDSIYRDAYLPFSQDQIDMDTAIERAAQPLRQFMLTQTRETDLSL
YARLGKQAAFAGPEQVPMQILLPAFVTSELKTAFQIGFTLFIPFLIIDLVIASVLMALGMMMLPPTTVSLPFKLMLFVMV
DGWQLLLGSLAQSFFS
>Mature_256_residues
MRRGPARGVWPLVLLALPLLIILLPFQAAHAAQQGLIQMHPLPDGGQRWSLPVQTLVLLTSLTFLPAALLLMSGFTRIII
VLSILRNALGTPSAPPNQILLGLALCLTFFVMSPVLDSIYRDAYLPFSQDQIDMDTAIERAAQPLRQFMLTQTRETDLSL
YARLGKQAAFAGPEQVPMQILLPAFVTSELKTAFQIGFTLFIPFLIIDLVIASVLMALGMMMLPPTTVSLPFKLMLFVMV
DGWQLLLGSLAQSFFS

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=225, Percent_Identity=74.6666666666667, Blast_Score=337, Evalue=6e-94,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 28177; Mature: 28177

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]