| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84626016
Identifier: 84626016
GI number: 84626016
Start: 4922860
End: 4924194
Strand: Reverse
Name: 84626016
Synonym: XOO_4359
Alternate gene names: NA
Gene position: 4924194-4922860 (Counterclockwise)
Preceding gene: 84626017
Following gene: 84626015
Centisome position: 99.68
GC content: 67.19
Gene sequence:
>1335_bases GTGAGCGATGCGGCGTCCCGCGCGAGGCCGCAGCGCGCGTGCAGCAAGCCGCTAGGATCGGCGCATCCCCCACTGCCTGC GAGATCGCATGCACCTGCGTTCGCGTTCGCTGTCTGTCTGTTGCTGGCGGCTGCGTTGCCCGCGCACGCGCTGGAGTTTT CCAAGGCCGAACTGGAGCGCGCCACCGCGCTGCAACAACGTCTGGTCACGCTGGATTCGCATCTGGACACGCCGGCCACT CTGGAGCGCGCCGACGTCGATGTGTTGCAGACGCATGCCGGCAATCGCCTGTCGCAGGTGCATTACCCGCGCATGGTCGA AGGGGCGCTGGATCGCGGCTTCTGGGCGGTCTACACCGGGCAGGGCCACCGCAGTGCGGCCGCGCATCTGGACGACCGCG ACGCCGGGCTGCAGCGCTTGCTCAAGATCCACACGCTGGTGGCCGCGCAACCGCAGCGCTTTGCATTGGCCACCACGCCG GCCGATGCCGCGCGCATCAAGGCCGCTGGCACGCGCGTGGTGTACATCGGCATGAAAAACGCCAGCCCGCTGGTGGCCGA CCCCACCGTGCTGCGCGTCTATTACGCGCAGGGGCTGCGCTTGATGAGCACCGTGCACTTTCTCAACAACGCCTTCGCCG ACTCGGCCACCGACACCAAAGGGGGCGAGTGGAAGGGCTTGAGCCCGGCCGGCAAACAACTGGTGCAGCAGGCGCAGGCG CCGGGCATCGTGATCGATCGATCGCATGCCTCCGATGCGGTGTTCGACCAGTTGATCGCGCTGTCGCCGGTGCCGATCGT GCTCTCGCACAGCGGCGCGCGTGCGGTCTACAACCACCCGCGCAACATCGACGATGCACGCCTGAAGGTGCTGGCCGTGC ATGGCGGGGTGATCCAGGTCAATTCCTACGGCGGCTATCTGGTGGACAGCGGCGCAAGCCCCGAGCGCAAGGCCGCCGAG AAGGCGCTCATCGATCACTACGGCGGCTGGGAGCACGTCAAGATCGCAGACGCCACCAAGCTCAGCGCCGCGCTGAAGGA ACTGGATGCGCGCTACCCGATCAAGCGCGCCACCGAAGAGAATTTCTGCGCGCATCTGGAGCATGTGCTGGCGGTGGTCG GGCCCCAGCATGTGGGCATCGGCATGGATCGGGACGGCGGTGGGGGGGGCTGGAAGATGTCTCCGATCTGCCGCGCATCA CCGCATGGCTGCTGCGCAAGGGCTACACCGAACAGCAGATCCCCGGTATTTGGGGGCGGTAATCTGCTGCGCGTGATGGG CCAGGCGCAGGCCTATGCGGCGGCGAATCGGGAATCGGGAGTGGGGAAGCGGTAG
Upstream 100 bases:
>100_bases CGTGCCCAGTTCGACACCGTTGTGCGTGGTCGCACCATCGGCATCGCCGTAGCGCCGGCCTCGCAACGCGCGCATCGCTC ACGCAATCGCGCCGGTTGGC
Downstream 100 bases:
>100_bases TGCCGTGATTCGGCAGTGGTGATTGGAGAGTGGCAAGACGCAAAGCGGACATCGCGCGAGTGGGTTGCCGCTGTGCTGCA TCGAACCCGGCGGTCGCAGG
Product: dipeptidase
Products: NA
Alternate protein names: Dipeptidase; Peptidase; Glutamine Amidotransferase Class II/Dipeptidase; Renal Dipeptidase Family Protein; Zn-Dependent Dipeptidase; Glutamine Amidotransferase; Microsomal Dipeptidase; Periplasmic Dipeptidase; Renal Dipeptidase Superfamily; Dipeptidase Family Protein; Amma-Glutamyl Hydrolase Family Peptidase; Thermostable Dipeptidase; Multidrug Resistance Protein B; Zn-Dependent Dipeptidase Microsomal Dipeptidase; Microsomal Dipeptidase Like Protein; Membrane-Bound Dipeptidase; Proline Dipeptidase; Microsomal Dipeptidase-Like Protein; Dipeptidase Pyoverdin Biosynthesis; Ipeptidase AC. Metallo Peptidase. MEROPS Family M; Renal Dipeptidase Superfamily Protein; Renal Dipeptidase; LOW QUALITY PROTEIN Dipeptidase
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MSDAASRARPQRACSKPLGSAHPPLPARSHAPAFAFAVCLLLAAALPAHALEFSKAELERATALQQRLVTLDSHLDTPAT LERADVDVLQTHAGNRLSQVHYPRMVEGALDRGFWAVYTGQGHRSAAAHLDDRDAGLQRLLKIHTLVAAQPQRFALATTP ADAARIKAAGTRVVYIGMKNASPLVADPTVLRVYYAQGLRLMSTVHFLNNAFADSATDTKGGEWKGLSPAGKQLVQQAQA PGIVIDRSHASDAVFDQLIALSPVPIVLSHSGARAVYNHPRNIDDARLKVLAVHGGVIQVNSYGGYLVDSGASPERKAAE KALIDHYGGWEHVKIADATKLSAALKELDARYPIKRATEENFCAHLEHVLAVVGPQHVGIGMDRDGGGGGWKMSPICRAS PHGCCARATPNSRSPVFGGGNLLRVMGQAQAYAAANRESGVGKR
Sequences:
>Translated_444_residues MSDAASRARPQRACSKPLGSAHPPLPARSHAPAFAFAVCLLLAAALPAHALEFSKAELERATALQQRLVTLDSHLDTPAT LERADVDVLQTHAGNRLSQVHYPRMVEGALDRGFWAVYTGQGHRSAAAHLDDRDAGLQRLLKIHTLVAAQPQRFALATTP ADAARIKAAGTRVVYIGMKNASPLVADPTVLRVYYAQGLRLMSTVHFLNNAFADSATDTKGGEWKGLSPAGKQLVQQAQA PGIVIDRSHASDAVFDQLIALSPVPIVLSHSGARAVYNHPRNIDDARLKVLAVHGGVIQVNSYGGYLVDSGASPERKAAE KALIDHYGGWEHVKIADATKLSAALKELDARYPIKRATEENFCAHLEHVLAVVGPQHVGIGMDRDGGGGGWKMSPICRAS PHGCCARATPNSRSPVFGGGNLLRVMGQAQAYAAANRESGVGKR >Mature_443_residues SDAASRARPQRACSKPLGSAHPPLPARSHAPAFAFAVCLLLAAALPAHALEFSKAELERATALQQRLVTLDSHLDTPATL ERADVDVLQTHAGNRLSQVHYPRMVEGALDRGFWAVYTGQGHRSAAAHLDDRDAGLQRLLKIHTLVAAQPQRFALATTPA DAARIKAAGTRVVYIGMKNASPLVADPTVLRVYYAQGLRLMSTVHFLNNAFADSATDTKGGEWKGLSPAGKQLVQQAQAP GIVIDRSHASDAVFDQLIALSPVPIVLSHSGARAVYNHPRNIDDARLKVLAVHGGVIQVNSYGGYLVDSGASPERKAAEK ALIDHYGGWEHVKIADATKLSAALKELDARYPIKRATEENFCAHLEHVLAVVGPQHVGIGMDRDGGGGGWKMSPICRASP HGCCARATPNSRSPVFGGGNLLRVMGQAQAYAAANRESGVGKR
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI11641269, Length=339, Percent_Identity=25.9587020648968, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI189458885, Length=293, Percent_Identity=26.6211604095563, Blast_Score=96, Evalue=1e-19, Organism=Homo sapiens, GI4758190, Length=293, Percent_Identity=26.6211604095563, Blast_Score=96, Evalue=1e-19, Organism=Homo sapiens, GI193211608, Length=335, Percent_Identity=25.0746268656716, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI193211610, Length=335, Percent_Identity=25.0746268656716, Blast_Score=91, Evalue=3e-18, Organism=Drosophila melanogaster, GI281362638, Length=393, Percent_Identity=24.4274809160305, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI281362636, Length=393, Percent_Identity=24.4274809160305, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI221475880, Length=450, Percent_Identity=23.3333333333333, Blast_Score=92, Evalue=7e-19, Organism=Drosophila melanogaster, GI161083233, Length=289, Percent_Identity=24.5674740484429, Blast_Score=87, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47251; Mature: 47120
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: PS00148 ARGINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAASRARPQRACSKPLGSAHPPLPARSHAPAFAFAVCLLLAAALPAHALEFSKAELER CCCCHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATALQQRLVTLDSHLDTPATLERADVDVLQTHAGNRLSQVHYPRMVEGALDRGFWAVYTG HHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHCCCCHHHHHCCCHHHHHHHCCCEEEEEEC QGHRSAAAHLDDRDAGLQRLLKIHTLVAAQPQRFALATTPADAARIKAAGTRVVYIGMKN CCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHEEECCCEEEEEEECC ASPLVADPTVLRVYYAQGLRLMSTVHFLNNAFADSATDTKGGEWKGLSPAGKQLVQQAQA CCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCC PGIVIDRSHASDAVFDQLIALSPVPIVLSHSGARAVYNHPRNIDDARLKVLAVHGGVIQV CCEEEECCCCHHHHHHHHHHCCCCCEEEECCCCHHHHCCCCCCCCHHEEEEEEECCEEEE NSYGGYLVDSGASPERKAAEKALIDHYGGWEHVKIADATKLSAALKELDARYPIKRATEE ECCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCCHHHCCHH NFCAHLEHVLAVVGPQHVGIGMDRDGGGGGWKMSPICRASPHGCCARATPNSRSPVFGGG HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC NLLRVMGQAQAYAAANRESGVGKR HHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SDAASRARPQRACSKPLGSAHPPLPARSHAPAFAFAVCLLLAAALPAHALEFSKAELER CCCHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATALQQRLVTLDSHLDTPATLERADVDVLQTHAGNRLSQVHYPRMVEGALDRGFWAVYTG HHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHCCCCHHHHHCCCHHHHHHHCCCEEEEEEC QGHRSAAAHLDDRDAGLQRLLKIHTLVAAQPQRFALATTPADAARIKAAGTRVVYIGMKN CCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHEEECCCEEEEEEECC ASPLVADPTVLRVYYAQGLRLMSTVHFLNNAFADSATDTKGGEWKGLSPAGKQLVQQAQA CCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCC PGIVIDRSHASDAVFDQLIALSPVPIVLSHSGARAVYNHPRNIDDARLKVLAVHGGVIQV CCEEEECCCCHHHHHHHHHHCCCCCEEEECCCCHHHHCCCCCCCCHHEEEEEEECCEEEE NSYGGYLVDSGASPERKAAEKALIDHYGGWEHVKIADATKLSAALKELDARYPIKRATEE ECCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCCHHHCCHH NFCAHLEHVLAVVGPQHVGIGMDRDGGGGGWKMSPICRASPHGCCARATPNSRSPVFGGG HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC NLLRVMGQAQAYAAANRESGVGKR HHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA