Click here to switch to the map view.

The map label for this gene is 84626004

Identifier: 84626004

GI number: 84626004

Start: 4910856

End: 4911593

Strand: Reverse

Name: 84626004

Synonym: XOO_4347

Alternate gene names: NA

Gene position: 4911593-4910856 (Counterclockwise)

Preceding gene: 84626005

Following gene: 84626003

Centisome position: 99.42

GC content: 63.28

Gene sequence:

>738_bases
GTGTTCGTTACGCTACATACTGGTTTCTGGCAGTTTTCGCCCATGCGGACACGCCGTCCTGCCGCCGAGCAATTGCATGC
CGATGAGCTGTTTCGTTCGCGTCTGGAGAACCAGATCGACGTGCGCCATCCGCTGGTCCAGCTGAGCCATCGGCTGCCGT
GGAGTGCGTTGGAGCAGGTGCTGTCGCCGCGGTTGCCGGCCACCACCAGCACAGGCGGTCGACCCGCATTGCCGGTGCGG
TTGATCGCTGGGCTGCTCTACCTCAAGCACGCCTACGACCTGTCCGATGAAGCGGTGTGCGAACGTTGGCTGGAAAATCC
ATACTGGCAGTTCTTCACCGGCGAGGTGGTGTTCCAGACCTGCTTGCCGTGCGATCCCAGCTCCCTGACCCGTTGGCGAC
AGCGTCTGGGCGAAGCCGGGATGGAAGCGCTGTTGGCGCACACGATCAACACCGCTCACGCGATGAAGGCGGTGGATGCA
CGCGAGTTGTCGCGGGTGATCGTGGATACCACCGTGCAGGAAAAAGCGATCGCCCATCCCACCGACAGCCGTTTGCTTGA
GGTGGCGCGCAAGAAGCTGGTGCTGCTGGCCAAGCGACACGGCATCGCACTGCGACAAACCTATGCGCGGCAAGGTCCGG
CGTTGCGCCGCAAGGCCGGGCGCTATGCGCATGCGCGCCAGTTCAAGCGCATGCGCAAGGTACTGCGACGCCAACGCACG
ATCCTGGGACGCGTATGA

Upstream 100 bases:

>100_bases
GAGGGTTTTTCAGGGGCGACCAATTAGTCGCACCTGAAAAACCCCAAAACCACATCCATTGCAAGGCTTAACCTGCGTTT
TAGGCGTACGGGAATTGCCA

Downstream 100 bases:

>100_bases
CGCGATCTGCAACGCAAGCTGGCCCAGCGGGAACCGTCGGTGCGTGAGCGCATCGGTGTCTGGTTGGAGCGCGCACACCG
GTTGTTGACACAGCGTCCCA

Product: ISXoo4 transposase

Products: NA

Alternate protein names: ORFA [H]

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MFVTLHTGFWQFSPMRTRRPAAEQLHADELFRSRLENQIDVRHPLVQLSHRLPWSALEQVLSPRLPATTSTGGRPALPVR
LIAGLLYLKHAYDLSDEAVCERWLENPYWQFFTGEVVFQTCLPCDPSSLTRWRQRLGEAGMEALLAHTINTAHAMKAVDA
RELSRVIVDTTVQEKAIAHPTDSRLLEVARKKLVLLAKRHGIALRQTYARQGPALRRKAGRYAHARQFKRMRKVLRRQRT
ILGRV

Sequences:

>Translated_245_residues
MFVTLHTGFWQFSPMRTRRPAAEQLHADELFRSRLENQIDVRHPLVQLSHRLPWSALEQVLSPRLPATTSTGGRPALPVR
LIAGLLYLKHAYDLSDEAVCERWLENPYWQFFTGEVVFQTCLPCDPSSLTRWRQRLGEAGMEALLAHTINTAHAMKAVDA
RELSRVIVDTTVQEKAIAHPTDSRLLEVARKKLVLLAKRHGIALRQTYARQGPALRRKAGRYAHARQFKRMRKVLRRQRT
ILGRV
>Mature_245_residues
MFVTLHTGFWQFSPMRTRRPAAEQLHADELFRSRLENQIDVRHPLVQLSHRLPWSALEQVLSPRLPATTSTGGRPALPVR
LIAGLLYLKHAYDLSDEAVCERWLENPYWQFFTGEVVFQTCLPCDPSSLTRWRQRLGEAGMEALLAHTINTAHAMKAVDA
RELSRVIVDTTVQEKAIAHPTDSRLLEVARKKLVLLAKRHGIALRQTYARQGPALRRKAGRYAHARQFKRMRKVLRRQRT
ILGRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008490 [H]

Pfam domain/function: PF05598 DUF772 [H]

EC number: NA

Molecular weight: Translated: 28195; Mature: 28195

Theoretical pI: Translated: 11.49; Mature: 11.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVTLHTGFWQFSPMRTRRPAAEQLHADELFRSRLENQIDVRHPLVQLSHRLPWSALEQV
CEEEEECCCEECCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LSPRLPATTSTGGRPALPVRLIAGLLYLKHAYDLSDEAVCERWLENPYWQFFTGEVVFQT
HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHH
CLPCDPSSLTRWRQRLGEAGMEALLAHTINTAHAMKAVDARELSRVIVDTTVQEKAIAHP
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TDSRLLEVARKKLVLLAKRHGIALRQTYARQGPALRRKAGRYAHARQFKRMRKVLRRQRT
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHH
ILGRV
HHCCC
>Mature Secondary Structure
MFVTLHTGFWQFSPMRTRRPAAEQLHADELFRSRLENQIDVRHPLVQLSHRLPWSALEQV
CEEEEECCCEECCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LSPRLPATTSTGGRPALPVRLIAGLLYLKHAYDLSDEAVCERWLENPYWQFFTGEVVFQT
HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHH
CLPCDPSSLTRWRQRLGEAGMEALLAHTINTAHAMKAVDARELSRVIVDTTVQEKAIAHP
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TDSRLLEVARKKLVLLAKRHGIALRQTYARQGPALRRKAGRYAHARQFKRMRKVLRRQRT
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHH
ILGRV
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8429568 [H]