Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is 84626000

Identifier: 84626000

GI number: 84626000

Start: 4907644

End: 4908150

Strand: Reverse

Name: 84626000

Synonym: XOO_4343

Alternate gene names: NA

Gene position: 4908150-4907644 (Counterclockwise)

Preceding gene: 84626003

Following gene: 84625998

Centisome position: 99.35

GC content: 69.43

Gene sequence:

>507_bases
ATGCCCGCCGCTGCCATCGCACCCCTGACGCCGTATCTCTCGATGGCCGCCATCGGCTACCTCTACTACCGGCGCATCCG
GCGCAGCTTCGGGCGCCAGCAATGCAAGCCGCTGGCCACGGCGGTACGCAGTGCGGTGCTGCTGATCGCTGTGGCAGCAC
TGGCGTTCGCGGTCTACGGGTTGCCGCAGGTGCGGCTCGGCATTGCCGCAGGCGCGCTGGTCGGCATCGGCCTGGGTGCG
CTGTCGCTGCGCTACACGCATGCCGAATGGACCGATGGCCAAGGCTGGTACACGCCCAATCGCTGGATCGGCGGCGGCCT
GATGCTGGTGCTGCTGGGGCGCCTGGCCTGGCGCTGGGCCCACGGTGCGTTCAATAGCCGTGCGGCGGCGGCCGGTTCGC
ATGCCAGCCCGCTGACCCTGGGAATCGCCGCGGCACTGGTGCTGTATTCGCTGGTGCACGTGGGCGGACTGTGGTGGAGG
TTGCGTCAGTTGCGCCTGCAGGCCTAA

Upstream 100 bases:

>100_bases
GGTGCTGCCGCCTGCAGAAACTGACATTTGGCACTTTGTTCGTGCCCATGGCTGGTTTCATTCTGCGCGGGTCGCTTCAC
TCATTCGCAAAGGATTCGCC

Downstream 100 bases:

>100_bases
CCCACATGGCGCGCTGATCCGCGGATCGCTTTCAACCTGCGACCGAAACGGACGCACCAGCTTCTCGCCCAGATTCTGCC
GCAGCGGCCGTGCGCGCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MPAAAIAPLTPYLSMAAIGYLYYRRIRRSFGRQQCKPLATAVRSAVLLIAVAALAFAVYGLPQVRLGIAAGALVGIGLGA
LSLRYTHAEWTDGQGWYTPNRWIGGGLMLVLLGRLAWRWAHGAFNSRAAAAGSHASPLTLGIAAALVLYSLVHVGGLWWR
LRQLRLQA

Sequences:

>Translated_168_residues
MPAAAIAPLTPYLSMAAIGYLYYRRIRRSFGRQQCKPLATAVRSAVLLIAVAALAFAVYGLPQVRLGIAAGALVGIGLGA
LSLRYTHAEWTDGQGWYTPNRWIGGGLMLVLLGRLAWRWAHGAFNSRAAAAGSHASPLTLGIAAALVLYSLVHVGGLWWR
LRQLRLQA
>Mature_167_residues
PAAAIAPLTPYLSMAAIGYLYYRRIRRSFGRQQCKPLATAVRSAVLLIAVAALAFAVYGLPQVRLGIAAGALVGIGLGAL
SLRYTHAEWTDGQGWYTPNRWIGGGLMLVLLGRLAWRWAHGAFNSRAAAAGSHASPLTLGIAAALVLYSLVHVGGLWWRL
RQLRLQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18049; Mature: 17917

Theoretical pI: Translated: 11.93; Mature: 11.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAAAIAPLTPYLSMAAIGYLYYRRIRRSFGRQQCKPLATAVRSAVLLIAVAALAFAVYG
CCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPQVRLGIAAGALVGIGLGALSLRYTHAEWTDGQGWYTPNRWIGGGLMLVLLGRLAWRWA
CCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
HGAFNSRAAAAGSHASPLTLGIAAALVLYSLVHVGGLWWRLRQLRLQA
HCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PAAAIAPLTPYLSMAAIGYLYYRRIRRSFGRQQCKPLATAVRSAVLLIAVAALAFAVYG
CCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPQVRLGIAAGALVGIGLGALSLRYTHAEWTDGQGWYTPNRWIGGGLMLVLLGRLAWRWA
CCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
HGAFNSRAAAAGSHASPLTLGIAAALVLYSLVHVGGLWWRLRQLRLQA
HCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA