| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84626000
Identifier: 84626000
GI number: 84626000
Start: 4907644
End: 4908150
Strand: Reverse
Name: 84626000
Synonym: XOO_4343
Alternate gene names: NA
Gene position: 4908150-4907644 (Counterclockwise)
Preceding gene: 84626003
Following gene: 84625998
Centisome position: 99.35
GC content: 69.43
Gene sequence:
>507_bases ATGCCCGCCGCTGCCATCGCACCCCTGACGCCGTATCTCTCGATGGCCGCCATCGGCTACCTCTACTACCGGCGCATCCG GCGCAGCTTCGGGCGCCAGCAATGCAAGCCGCTGGCCACGGCGGTACGCAGTGCGGTGCTGCTGATCGCTGTGGCAGCAC TGGCGTTCGCGGTCTACGGGTTGCCGCAGGTGCGGCTCGGCATTGCCGCAGGCGCGCTGGTCGGCATCGGCCTGGGTGCG CTGTCGCTGCGCTACACGCATGCCGAATGGACCGATGGCCAAGGCTGGTACACGCCCAATCGCTGGATCGGCGGCGGCCT GATGCTGGTGCTGCTGGGGCGCCTGGCCTGGCGCTGGGCCCACGGTGCGTTCAATAGCCGTGCGGCGGCGGCCGGTTCGC ATGCCAGCCCGCTGACCCTGGGAATCGCCGCGGCACTGGTGCTGTATTCGCTGGTGCACGTGGGCGGACTGTGGTGGAGG TTGCGTCAGTTGCGCCTGCAGGCCTAA
Upstream 100 bases:
>100_bases GGTGCTGCCGCCTGCAGAAACTGACATTTGGCACTTTGTTCGTGCCCATGGCTGGTTTCATTCTGCGCGGGTCGCTTCAC TCATTCGCAAAGGATTCGCC
Downstream 100 bases:
>100_bases CCCACATGGCGCGCTGATCCGCGGATCGCTTTCAACCTGCGACCGAAACGGACGCACCAGCTTCTCGCCCAGATTCTGCC GCAGCGGCCGTGCGCGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MPAAAIAPLTPYLSMAAIGYLYYRRIRRSFGRQQCKPLATAVRSAVLLIAVAALAFAVYGLPQVRLGIAAGALVGIGLGA LSLRYTHAEWTDGQGWYTPNRWIGGGLMLVLLGRLAWRWAHGAFNSRAAAAGSHASPLTLGIAAALVLYSLVHVGGLWWR LRQLRLQA
Sequences:
>Translated_168_residues MPAAAIAPLTPYLSMAAIGYLYYRRIRRSFGRQQCKPLATAVRSAVLLIAVAALAFAVYGLPQVRLGIAAGALVGIGLGA LSLRYTHAEWTDGQGWYTPNRWIGGGLMLVLLGRLAWRWAHGAFNSRAAAAGSHASPLTLGIAAALVLYSLVHVGGLWWR LRQLRLQA >Mature_167_residues PAAAIAPLTPYLSMAAIGYLYYRRIRRSFGRQQCKPLATAVRSAVLLIAVAALAFAVYGLPQVRLGIAAGALVGIGLGAL SLRYTHAEWTDGQGWYTPNRWIGGGLMLVLLGRLAWRWAHGAFNSRAAAAGSHASPLTLGIAAALVLYSLVHVGGLWWRL RQLRLQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18049; Mature: 17917
Theoretical pI: Translated: 11.93; Mature: 11.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAAIAPLTPYLSMAAIGYLYYRRIRRSFGRQQCKPLATAVRSAVLLIAVAALAFAVYG CCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LPQVRLGIAAGALVGIGLGALSLRYTHAEWTDGQGWYTPNRWIGGGLMLVLLGRLAWRWA CCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH HGAFNSRAAAAGSHASPLTLGIAAALVLYSLVHVGGLWWRLRQLRLQA HCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PAAAIAPLTPYLSMAAIGYLYYRRIRRSFGRQQCKPLATAVRSAVLLIAVAALAFAVYG CCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LPQVRLGIAAGALVGIGLGALSLRYTHAEWTDGQGWYTPNRWIGGGLMLVLLGRLAWRWA CCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH HGAFNSRAAAAGSHASPLTLGIAAALVLYSLVHVGGLWWRLRQLRLQA HCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA