Click here to switch to the map view.

The map label for this gene is ctpA [H]

Identifier: 84625979

GI number: 84625979

Start: 4883957

End: 4885480

Strand: Reverse

Name: ctpA [H]

Synonym: XOO_4322

Alternate gene names: 84625979

Gene position: 4885480-4883957 (Counterclockwise)

Preceding gene: 84625980

Following gene: 84625975

Centisome position: 98.89

GC content: 67.45

Gene sequence:

>1524_bases
ATGCGCGTAGCCGTCCTGTCCGTTGCCCTGTCGCTGGCCCTGTTCGCGTCGCCCGGTTGGGCGCAGAAGGCCGGCCCCGC
CGCCGCCCAGGCCACTGCGGACGATCCAGAAGCCAATGAAGCTGCTGTTTCCAAGGTGCCGCTGGACGAAATTCGTCGCT
TCGTGGCGGTGTACAACGCGGTCAAGCAGGCCTACGTCGACCCGGTCGAAGACAAGAAGCTGATGCACGCCGCCGTGCGT
GGCCTGCTCTCGGACCTGGACCCGCACAGCACCTATTTCGACAAGGAAGACGCCGAAGCCTTCGACGAACAGGCCACTGG
CGCCTACGACGGGATCGGCGTGGAATTGCTGCAGCAGCAGGACAACACGCTGAAGGTGATCGCGCCGATCGACGACACCC
CGGCCGCGCGCGCCGGCATCCGCGCCGGCGATGTGATCGTGGCCATCGACGGCAAGCCGATCGATGCCAGCAAGGCGATG
GAGCCGCTGCGCGGCGCATCCGGCAGCAAGGTGGTTCTGACCATCGTGCGCGACAAGACGCCCAAGCCGTTCGATGTGAC
CCTGCAGCGCGAAACCATCCGCGTGGCCAGCGTGCGCAGCAAGATGCTGGAGCCGGGCTACGGCTACATCCGCATCAGCA
CCTTCCAGGCCGACACCGGTGCCGATTTCCAGAAGAACCTCAAGCAGCTGCAGGCTGGCGGCAAGTTGCGCGGCCTTGTG
CTGGATCTGCGCAGCAACCCCGGCGGTCTGCTGACCTCGGCGGTGCAGGTGGCCGACGATCTGCTCGACAAGGGCAATAT
CGTCAGCACGCGCGGACGCATCTCCATCAGCGATGCCAAGTTCGACGCCACCCCGGGCGATCTGGTCAACGGCGCGCCGG
TCGTGGTGCTGGTGGACGCCGGCTCGGCCAGTGCCTCGGAAGTGCTGGCCGGGGCGCTGCGCGACAACAAGCGTGCACGC
ATCATCGGCAGCCGCACCTTCGGTAAGGGTTCGGTGCAGACCGTGCTGCCGCTGGACAACGGCGACTCGGTCAAGCTCAC
CACCGCGCGTTATTACACGCCGAGTGGCAAGTCGATCCAGGCCAGCGGCATCGTGCCGGACGTGATGCTCACCCCCGAAC
CGCAGCCAGGCGATGCCGACGTGCCGGCCAGCCTGACCGACTACAACGAAGCCACCTTGCCGGGCCACCTGCGTGGCGAC
GACGAAGGCGAAGAAGGCTACAGCGCCGGCGACGTGTTGCCGGGCGATGGCCCGATCAGCGAAGCCCTGGCCGAACTCAA
GCAACCCGGCTCCGCCGCCAAAGCGCAAGCCGCACGCAAGGCCAAGGCGCAGGCCGCGCAGAAGGCGAAAGCGGCCAAGA
CCGGTGCCGAGCCCAAGCCCGCCGCAGCGCGCCCGGCAACCACGGACAAGCCCAAATCGGCCGAACCGGCGGGCAAAGCC
AAGCCGGCTACCGCACCCACTGCGCCAACCGAGCCAGCACAGCCGACACCGCCAGCGGACAAGCCTGCCGAGCCGGTCAA
CTAA

Upstream 100 bases:

>100_bases
GCCGCGCTGCCCGCAATTCAACGCGGATTTACCGCAGCTTCGCGCATAATCCGGTCAGCTCCGCGCTGCGGGGCGCCTTA
TCTCTTTGTCGGAGTGCTTC

Downstream 100 bases:

>100_bases
GAGCGGCTAACAACACGTAGCGAGCAGCGGTCAGGTGGGCGCGGACGGCGCGCTCACAACCGCAGTGGACGCGTGGTCCA
TGCCGATTCCGAGCACCGGC

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MRVAVLSVALSLALFASPGWAQKAGPAAAQATADDPEANEAAVSKVPLDEIRRFVAVYNAVKQAYVDPVEDKKLMHAAVR
GLLSDLDPHSTYFDKEDAEAFDEQATGAYDGIGVELLQQQDNTLKVIAPIDDTPAARAGIRAGDVIVAIDGKPIDASKAM
EPLRGASGSKVVLTIVRDKTPKPFDVTLQRETIRVASVRSKMLEPGYGYIRISTFQADTGADFQKNLKQLQAGGKLRGLV
LDLRSNPGGLLTSAVQVADDLLDKGNIVSTRGRISISDAKFDATPGDLVNGAPVVVLVDAGSASASEVLAGALRDNKRAR
IIGSRTFGKGSVQTVLPLDNGDSVKLTTARYYTPSGKSIQASGIVPDVMLTPEPQPGDADVPASLTDYNEATLPGHLRGD
DEGEEGYSAGDVLPGDGPISEALAELKQPGSAAKAQAARKAKAQAAQKAKAAKTGAEPKPAAARPATTDKPKSAEPAGKA
KPATAPTAPTEPAQPTPPADKPAEPVN

Sequences:

>Translated_507_residues
MRVAVLSVALSLALFASPGWAQKAGPAAAQATADDPEANEAAVSKVPLDEIRRFVAVYNAVKQAYVDPVEDKKLMHAAVR
GLLSDLDPHSTYFDKEDAEAFDEQATGAYDGIGVELLQQQDNTLKVIAPIDDTPAARAGIRAGDVIVAIDGKPIDASKAM
EPLRGASGSKVVLTIVRDKTPKPFDVTLQRETIRVASVRSKMLEPGYGYIRISTFQADTGADFQKNLKQLQAGGKLRGLV
LDLRSNPGGLLTSAVQVADDLLDKGNIVSTRGRISISDAKFDATPGDLVNGAPVVVLVDAGSASASEVLAGALRDNKRAR
IIGSRTFGKGSVQTVLPLDNGDSVKLTTARYYTPSGKSIQASGIVPDVMLTPEPQPGDADVPASLTDYNEATLPGHLRGD
DEGEEGYSAGDVLPGDGPISEALAELKQPGSAAKAQAARKAKAQAAQKAKAAKTGAEPKPAAARPATTDKPKSAEPAGKA
KPATAPTAPTEPAQPTPPADKPAEPVN
>Mature_507_residues
MRVAVLSVALSLALFASPGWAQKAGPAAAQATADDPEANEAAVSKVPLDEIRRFVAVYNAVKQAYVDPVEDKKLMHAAVR
GLLSDLDPHSTYFDKEDAEAFDEQATGAYDGIGVELLQQQDNTLKVIAPIDDTPAARAGIRAGDVIVAIDGKPIDASKAM
EPLRGASGSKVVLTIVRDKTPKPFDVTLQRETIRVASVRSKMLEPGYGYIRISTFQADTGADFQKNLKQLQAGGKLRGLV
LDLRSNPGGLLTSAVQVADDLLDKGNIVSTRGRISISDAKFDATPGDLVNGAPVVVLVDAGSASASEVLAGALRDNKRAR
IIGSRTFGKGSVQTVLPLDNGDSVKLTTARYYTPSGKSIQASGIVPDVMLTPEPQPGDADVPASLTDYNEATLPGHLRGD
DEGEEGYSAGDVLPGDGPISEALAELKQPGSAAKAQAARKAKAQAAQKAKAAKTGAEPKPAAARPATTDKPKSAEPAGKA
KPATAPTAPTEPAQPTPPADKPAEPVN

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=327, Percent_Identity=31.4984709480122, Blast_Score=121, Evalue=9e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 52635; Mature: 52635

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVAVLSVALSLALFASPGWAQKAGPAAAQATADDPEANEAAVSKVPLDEIRRFVAVYNA
CEEHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHH
VKQAYVDPVEDKKLMHAAVRGLLSDLDPHSTYFDKEDAEAFDEQATGAYDGIGVELLQQQ
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCC
DNTLKVIAPIDDTPAARAGIRAGDVIVAIDGKPIDASKAMEPLRGASGSKVVLTIVRDKT
CCEEEEEECCCCCCHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEECCC
PKPFDVTLQRETIRVASVRSKMLEPGYGYIRISTFQADTGADFQKNLKQLQAGGKLRGLV
CCCEEEEEEHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEE
LDLRSNPGGLLTSAVQVADDLLDKGNIVSTRGRISISDAKFDATPGDLVNGAPVVVLVDA
EEECCCCCHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCCCCCCCCCCCCEEEEEEC
GSASASEVLAGALRDNKRARIIGSRTFGKGSVQTVLPLDNGDSVKLTTARYYTPSGKSIQ
CCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCEEEEEEEEEECCCCCCEE
ASGIVPDVMLTPEPQPGDADVPASLTDYNEATLPGHLRGDDEGEEGYSAGDVLPGDGPIS
ECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
EALAELKQPGSAAKAQAARKAKAQAAQKAKAAKTGAEPKPAAARPATTDKPKSAEPAGKA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
KPATAPTAPTEPAQPTPPADKPAEPVN
CCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRVAVLSVALSLALFASPGWAQKAGPAAAQATADDPEANEAAVSKVPLDEIRRFVAVYNA
CEEHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHH
VKQAYVDPVEDKKLMHAAVRGLLSDLDPHSTYFDKEDAEAFDEQATGAYDGIGVELLQQQ
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCC
DNTLKVIAPIDDTPAARAGIRAGDVIVAIDGKPIDASKAMEPLRGASGSKVVLTIVRDKT
CCEEEEEECCCCCCHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEECCC
PKPFDVTLQRETIRVASVRSKMLEPGYGYIRISTFQADTGADFQKNLKQLQAGGKLRGLV
CCCEEEEEEHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEE
LDLRSNPGGLLTSAVQVADDLLDKGNIVSTRGRISISDAKFDATPGDLVNGAPVVVLVDA
EEECCCCCHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCCCCCCCCCCCCEEEEEEC
GSASASEVLAGALRDNKRARIIGSRTFGKGSVQTVLPLDNGDSVKLTTARYYTPSGKSIQ
CCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCEEEEEEEEEECCCCCCEE
ASGIVPDVMLTPEPQPGDADVPASLTDYNEATLPGHLRGDDEGEEGYSAGDVLPGDGPIS
ECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
EALAELKQPGSAAKAQAARKAKAQAAQKAKAAKTGAEPKPAAARPATTDKPKSAEPAGKA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
KPATAPTAPTEPAQPTPPADKPAEPVN
CCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]