| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625853
Identifier: 84625853
GI number: 84625853
Start: 4741173
End: 4742036
Strand: Reverse
Name: 84625853
Synonym: XOO_4196
Alternate gene names: NA
Gene position: 4742036-4741173 (Counterclockwise)
Preceding gene: 84625855
Following gene: 84625850
Centisome position: 95.99
GC content: 66.44
Gene sequence:
>864_bases ATGGCGGCTTCCACCAACCTGCGCCATGCTGCATGCCCCGATTCCAAGGCCACTTCCATGCGCGGCACCGTCTTTCTCGC ACCGCTGTTGCTGCTGGCGGCCTTCGCGGCGCATGCTGAGGCCGCAAGCCCGCAGTTTTCCTCGCGGCAATGCGACGTCA GCACCTCCTATGACGTACTGGCAGACAGCGGCGGCATCTGGCTGCGGCGCAAGCAGGGCGTGCCGCGCGAGATCTTCTTT CACGCTGGCGAGCTCAATGTGGAACGCCAGCCGCAGCCGGTCAGCGCTGCCGATGCACAACGGTTGCGCGAGCTCGAACG CAGTACCCGTGCGCTGATGCCGGCCGTGACGTCCATCGCCCAGTCGGTGGTCGACATCACCTTCGACGCACTGGGCGGGG TGGTGCACGTGCTGTCCGGTAGCGCACGCCAACAGCGCAAGGTCGAACAGCTACGCGCAGCGGCACGCGCGCAGGTCGAT GGCAGCCTCGGGCGTGGACGGTGGGAGCAAGCGTTGTTCGATGAACGCTTCGGAGACAACGTCGAACATGCCGCCGAGAA GCTGGCCGGCAGCCTCACCCGCAGTGTGCTGTGGACGGTGATGACCGGACGCGCCGCGCAGATGGAACGCCGCGGTGCGG ACCTGGATGCGCAGATGCAGCAGCAGATGCAGAGCCGCAGCGACGTGCTGGAAGCCCAGGCCCGCACCCTGTGCGTGCAG GCACAGGCGCTCTATGCAGTGCAGCAAGCGCTGGAGTACCGCTTCAACGGCGAGCGCCTGCAGATGCTGGAACTCAACCC GCATCCGCAGACGCCATCGGAGGATGCGCAGGTCTCCAGCAGCATTGTGACGGTGACCCGCTAG
Upstream 100 bases:
>100_bases AGCAGCCTGCTAGAGGCAGTCCATGTGCCGATGCACGACCCGGCGCACGCTTTGCGGAAACGCTTTCAGCGCGCACCTGC GGCACCCTGACTTTCTTCCC
Downstream 100 bases:
>100_bases TAGATAGCGCGTATCGCAGGGCGCGCGCTTGGTCGACGCTGGCGCCGTGCAACAGGGTGCATCGGTTATGGGCGGTGCAT GGAAGAGCAGGCGACGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MAASTNLRHAACPDSKATSMRGTVFLAPLLLLAAFAAHAEAASPQFSSRQCDVSTSYDVLADSGGIWLRRKQGVPREIFF HAGELNVERQPQPVSAADAQRLRELERSTRALMPAVTSIAQSVVDITFDALGGVVHVLSGSARQQRKVEQLRAAARAQVD GSLGRGRWEQALFDERFGDNVEHAAEKLAGSLTRSVLWTVMTGRAAQMERRGADLDAQMQQQMQSRSDVLEAQARTLCVQ AQALYAVQQALEYRFNGERLQMLELNPHPQTPSEDAQVSSSIVTVTR
Sequences:
>Translated_287_residues MAASTNLRHAACPDSKATSMRGTVFLAPLLLLAAFAAHAEAASPQFSSRQCDVSTSYDVLADSGGIWLRRKQGVPREIFF HAGELNVERQPQPVSAADAQRLRELERSTRALMPAVTSIAQSVVDITFDALGGVVHVLSGSARQQRKVEQLRAAARAQVD GSLGRGRWEQALFDERFGDNVEHAAEKLAGSLTRSVLWTVMTGRAAQMERRGADLDAQMQQQMQSRSDVLEAQARTLCVQ AQALYAVQQALEYRFNGERLQMLELNPHPQTPSEDAQVSSSIVTVTR >Mature_286_residues AASTNLRHAACPDSKATSMRGTVFLAPLLLLAAFAAHAEAASPQFSSRQCDVSTSYDVLADSGGIWLRRKQGVPREIFFH AGELNVERQPQPVSAADAQRLRELERSTRALMPAVTSIAQSVVDITFDALGGVVHVLSGSARQQRKVEQLRAAARAQVDG SLGRGRWEQALFDERFGDNVEHAAEKLAGSLTRSVLWTVMTGRAAQMERRGADLDAQMQQQMQSRSDVLEAQARTLCVQA QALYAVQQALEYRFNGERLQMLELNPHPQTPSEDAQVSSSIVTVTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31400; Mature: 31269
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASTNLRHAACPDSKATSMRGTVFLAPLLLLAAFAAHAEAASPQFSSRQCDVSTSYDVL CCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH ADSGGIWLRRKQGVPREIFFHAGELNVERQPQPVSAADAQRLRELERSTRALMPAVTSIA CCCCCEEEEECCCCCHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QSVVDITFDALGGVVHVLSGSARQQRKVEQLRAAARAQVDGSLGRGRWEQALFDERFGDN HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC VEHAAEKLAGSLTRSVLWTVMTGRAAQMERRGADLDAQMQQQMQSRSDVLEAQARTLCVQ HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AQALYAVQQALEYRFNGERLQMLELNPHPQTPSEDAQVSSSIVTVTR HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHCEEEECC >Mature Secondary Structure AASTNLRHAACPDSKATSMRGTVFLAPLLLLAAFAAHAEAASPQFSSRQCDVSTSYDVL CCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH ADSGGIWLRRKQGVPREIFFHAGELNVERQPQPVSAADAQRLRELERSTRALMPAVTSIA CCCCCEEEEECCCCCHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QSVVDITFDALGGVVHVLSGSARQQRKVEQLRAAARAQVDGSLGRGRWEQALFDERFGDN HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC VEHAAEKLAGSLTRSVLWTVMTGRAAQMERRGADLDAQMQQQMQSRSDVLEAQARTLCVQ HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AQALYAVQQALEYRFNGERLQMLELNPHPQTPSEDAQVSSSIVTVTR HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA