| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625791
Identifier: 84625791
GI number: 84625791
Start: 4660756
End: 4662069
Strand: Reverse
Name: 84625791
Synonym: XOO_4134
Alternate gene names: NA
Gene position: 4662069-4660756 (Counterclockwise)
Preceding gene: 84625792
Following gene: 84625789
Centisome position: 94.37
GC content: 60.43
Gene sequence:
>1314_bases ATGCGCACGAATTTTCTTCCGCGCAGCTATTATCGCGGCGCTGCAGAACAAGCCAGCTCAGCTGCTGCCGATGTGCCAGC AGCCACTCCGGAGTCATGTTCATCCCACGTGCTGCATCAAGCTCCCAGGACTGATGCGGTGAACAATACCTCCAGGTCGC CCCGCGCAATGCTCGCGTCAGCGCGCAAGTCGCTAGCTAGCCTGCGCAAGCGACTGCCTATGATGTGCCTGGGTTCACCG ACCACCGAAGCAACCCAGACCCCGGGTAAGGCATCCACACCCCACGCCTCCGTGCAGAGTCCGCCGCGACCGCAGATGGC GCAAGCCGGCCTCGACGCGCCAGCGCCGGATGCCATGGGCAAACCCTTCTACCTGAATCCGCTGCGCCCCCCACCACGGC ATCAGGCACCGGTGGCGCCTGCACGTACTAGAGAGCCCGTGCAGGTGCGGCCAAGCCGCAACGAAGACAGATGGCAACAG CAACAATCTCCCCATCGACGCAATGCAACCACCCAGGCGCCGCGGCAAATGGAACCTACCCGCGCTGCAGGGCGCGTGCC GGTTCGCGAATACGAACAAAACGGCAGCAGTCACTGGCGACAGCAGGCGCCGGACCGCATCGTGACTGACCGAGTGAGGC AGCCGCGCCTCCCAGAGTCGCCCCCATTGCCGGCGTCACTAAGCGTGTCGCCGACGTCGTCCTCGCCGACTCAAGGCAAG CGGCAGACGCTATTGGGCAGGCTGAATGCGCAATTGGTCCCGTATAACCAGAGGAAATATCAGATCGATACCCGTGAAGA CCCTACGCCTACAGAAGAGGAGCGGGAGTTACTCAGAACGCGTCAGGTACTCATCGACCAACGCAATGAAATCCGTGACA TTCAGCTCGACAGTATGCTCACAGGGCTTGCCCCTATGGAAAATATCCACCCGCCGAAGACAACGACCAGTCGTGTGAGT GTTGTCCAACACAAGGTGATTGAGACCAATAGGCGCGCATTCTTGGCTGTCGAAGGCAAAGAACTCGACATGGGCTTGAT CGGCAGGGATTACGCAAGGGCGCAGCGTCGCATTGAGCCGCTGGAGGCCAGCGGGGCCGATTACAGGAAGATCAAACGTC TGAAACGCATGATGGAGGGTTACCAAAACTGGCTGGCGTTGCGGCAGATGATCGATGACATCAATGATCAGCTCGCACTG CTGGGCGCACCACAGCTGAGCGACAGCGACCCTAGTACACCGCGAGAGCGGGAGGATGCTGCTCAGGAGCAGCTAGACAG GCACGGAGACTCAATGGAGAACGGTTACCGATAA
Upstream 100 bases:
>100_bases GACGCTCGCGCTTTCGGACTGCGCGACGCCGGTTCGCCACCCGTCTTCGGCACCGCAATGGGATCGCTACGATGGATGGA CAGTCCGAAAGGAGTAAGTG
Downstream 100 bases:
>100_bases TGAAAATCCTGACGGCCAGGAGCAGTGGCACTGCACGCGCATCGCAGCCCCCGGCCCGCGTGCGTGATGCAGCATGGGCC AAGGGACTGCGCACGCTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MRTNFLPRSYYRGAAEQASSAAADVPAATPESCSSHVLHQAPRTDAVNNTSRSPRAMLASARKSLASLRKRLPMMCLGSP TTEATQTPGKASTPHASVQSPPRPQMAQAGLDAPAPDAMGKPFYLNPLRPPPRHQAPVAPARTREPVQVRPSRNEDRWQQ QQSPHRRNATTQAPRQMEPTRAAGRVPVREYEQNGSSHWRQQAPDRIVTDRVRQPRLPESPPLPASLSVSPTSSSPTQGK RQTLLGRLNAQLVPYNQRKYQIDTREDPTPTEEERELLRTRQVLIDQRNEIRDIQLDSMLTGLAPMENIHPPKTTTSRVS VVQHKVIETNRRAFLAVEGKELDMGLIGRDYARAQRRIEPLEASGADYRKIKRLKRMMEGYQNWLALRQMIDDINDQLAL LGAPQLSDSDPSTPREREDAAQEQLDRHGDSMENGYR
Sequences:
>Translated_437_residues MRTNFLPRSYYRGAAEQASSAAADVPAATPESCSSHVLHQAPRTDAVNNTSRSPRAMLASARKSLASLRKRLPMMCLGSP TTEATQTPGKASTPHASVQSPPRPQMAQAGLDAPAPDAMGKPFYLNPLRPPPRHQAPVAPARTREPVQVRPSRNEDRWQQ QQSPHRRNATTQAPRQMEPTRAAGRVPVREYEQNGSSHWRQQAPDRIVTDRVRQPRLPESPPLPASLSVSPTSSSPTQGK RQTLLGRLNAQLVPYNQRKYQIDTREDPTPTEEERELLRTRQVLIDQRNEIRDIQLDSMLTGLAPMENIHPPKTTTSRVS VVQHKVIETNRRAFLAVEGKELDMGLIGRDYARAQRRIEPLEASGADYRKIKRLKRMMEGYQNWLALRQMIDDINDQLAL LGAPQLSDSDPSTPREREDAAQEQLDRHGDSMENGYR >Mature_437_residues MRTNFLPRSYYRGAAEQASSAAADVPAATPESCSSHVLHQAPRTDAVNNTSRSPRAMLASARKSLASLRKRLPMMCLGSP TTEATQTPGKASTPHASVQSPPRPQMAQAGLDAPAPDAMGKPFYLNPLRPPPRHQAPVAPARTREPVQVRPSRNEDRWQQ QQSPHRRNATTQAPRQMEPTRAAGRVPVREYEQNGSSHWRQQAPDRIVTDRVRQPRLPESPPLPASLSVSPTSSSPTQGK RQTLLGRLNAQLVPYNQRKYQIDTREDPTPTEEERELLRTRQVLIDQRNEIRDIQLDSMLTGLAPMENIHPPKTTTSRVS VVQHKVIETNRRAFLAVEGKELDMGLIGRDYARAQRRIEPLEASGADYRKIKRLKRMMEGYQNWLALRQMIDDINDQLAL LGAPQLSDSDPSTPREREDAAQEQLDRHGDSMENGYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49077; Mature: 49077
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTNFLPRSYYRGAAEQASSAAADVPAATPESCSSHVLHQAPRTDAVNNTSRSPRAMLAS CCCCCCCHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH ARKSLASLRKRLPMMCLGSPTTEATQTPGKASTPHASVQSPPRPQMAQAGLDAPAPDAMG HHHHHHHHHHCCCEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC KPFYLNPLRPPPRHQAPVAPARTREPVQVRPSRNEDRWQQQQSPHRRNATTQAPRQMEPT CCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHCCCHHCCCCCCCCCCCCCH RAAGRVPVREYEQNGSSHWRQQAPDRIVTDRVRQPRLPESPPLPASLSVSPTSSSPTQGK HHHCCCCHHHHHCCCHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCHH RQTLLGRLNAQLVPYNQRKYQIDTREDPTPTEEERELLRTRQVLIDQRNEIRDIQLDSML HHHHHHHHCCEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGLAPMENIHPPKTTTSRVSVVQHKVIETNRRAFLAVEGKELDMGLIGRDYARAQRRIEP HHCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCC LEASGADYRKIKRLKRMMEGYQNWLALRQMIDDINDQLALLGAPQLSDSDPSTPREREDA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHH AQEQLDRHGDSMENGYR HHHHHHHCCCCHHCCCC >Mature Secondary Structure MRTNFLPRSYYRGAAEQASSAAADVPAATPESCSSHVLHQAPRTDAVNNTSRSPRAMLAS CCCCCCCHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH ARKSLASLRKRLPMMCLGSPTTEATQTPGKASTPHASVQSPPRPQMAQAGLDAPAPDAMG HHHHHHHHHHCCCEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC KPFYLNPLRPPPRHQAPVAPARTREPVQVRPSRNEDRWQQQQSPHRRNATTQAPRQMEPT CCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHCCCHHCCCCCCCCCCCCCH RAAGRVPVREYEQNGSSHWRQQAPDRIVTDRVRQPRLPESPPLPASLSVSPTSSSPTQGK HHHCCCCHHHHHCCCHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCHH RQTLLGRLNAQLVPYNQRKYQIDTREDPTPTEEERELLRTRQVLIDQRNEIRDIQLDSML HHHHHHHHCCEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGLAPMENIHPPKTTTSRVSVVQHKVIETNRRAFLAVEGKELDMGLIGRDYARAQRRIEP HHCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCC LEASGADYRKIKRLKRMMEGYQNWLALRQMIDDINDQLALLGAPQLSDSDPSTPREREDA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHH AQEQLDRHGDSMENGYR HHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA