| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625721
Identifier: 84625721
GI number: 84625721
Start: 4585930
End: 4588353
Strand: Reverse
Name: 84625721
Synonym: XOO_4064
Alternate gene names: NA
Gene position: 4588353-4585930 (Counterclockwise)
Preceding gene: 84625722
Following gene: 84625720
Centisome position: 92.88
GC content: 66.46
Gene sequence:
>2424_bases ATGCCGCGCCTGCGGCCGGCGTGCGTTCGGCCGCTGCAGCAGGACACGCACACCATGGCGCTTGAGTTGAACGCAAACCG CCGCATCGGCCTGGCGCTGCTGTGGCTGGCATTGCTGGCGGTGGCCGGATTCTGGTTGAGCGAGACGCTCAAGGTTACCG GGGATCTACGCAAATTCATGCCCGCCCCGCGCACGCCGGCGCAAAAACTGTTGATCGAAGAACTCGGCGAAGGCCCTGGA TCGCGGCTGCTGCTGATGGCGTTGTCCAATAGCGACCCCGTCACCTTGGCCGAGCAGTCGCAGCAACTGCAGAAAGCACT GGCCGCACAGCCGGAGCTGTTCGAGCTGGTCGGCAACGGTGGTAACGCCGGGTTGGAGGCGATTCCCAAGCGCTTGCTGC CGTATCGCTATCTGCTCAGCGACAGCTTCGACAAGACTCCGCTGGATGCGCCCACGTTGGAAGCGGCGTTGCAGGCGCGC GTGCAGGATCTGGGCTCGCCGGCGGCAGCCATGGTGGAGCCGTTGCTGCCGCGCGACCCCACGATGGAAATCCTGCATCT GGCCGAAACCCTGCAGCCGGCAGCGATGCCGCAGACGCGCAATGACGTGTGGTTCGATCGTGCCGGCACGTCGGCGCTGT TGATCGTGCAGACGCGCGCGGCCGGCTTCGACCCCACCGGCCAGCAGCTGGCCTACGACGCCGTGCAAGCGGCCTTCGCG AAAGTCAGCAAGGGCACGTCCACGCGCTTGACGCTGACCGGGCCGGGTGCATTCGCGGTGGAAATCACCGCGCGCACCCA AGGCGAGGCGCAATGGATCGGCACGCTGGATACGGTGGGCCTGGTGCTGTTGCTGCTGGTGGCCTACCGCAGCTGGAAGA TTCCGGTGCTCGGCGTGTTGCCCCTGGCCAGCGCCGGTCTGGCCGGCTTGGGCGCTGTCGCAGTGCTGTTCGACGGCGTG CACGGCATCACCGTGGCGTTCGGGTTCACCCTGATCGGCGTGGTACAGGATTATCCGATTCACTTGTTTAGTCATCAGCG CCCCGGTCTGGATCCGCGCGAAAACGCACGGCATCTGTGGCCGACGTTGGTCACCGGCGTGGTTTCCACCTGCATTGCCT ATGTGACCTTCCTGTTTTCCGGTGTGGACGGTTTGCGGCAGCTGGCGGTGTTCACCATCGCCGGCCTTGCCACCGCCGCG GTCACTACGCGCTGGATGCTGCCGGCCTTGATCGATCCGGCTCCGCGCGACTATGCCGATTCGCGCCTGCTGGCCGTGCT GTGGCGTGGCGTGGCACGCTTGCCGCGGCCACGCATCGTCAGCCTGGCGGTGATGGCCGTGCTCAGCATTGCCGTGATCG TGCTTGCGCCGGGGCAGTTCTGGCAGAACGATCTGTCGAAGCTGACGCCGGTGCCGCCCAAGGCATTGGCGCAGGACATG CACCTGCGTCAGGAACTGGGTGCGCCGGATGTGCGTTACGTGCTGGCGCTACCGGCCGCGAACGATGAGGCGGCACTGCA GGCCAGCGAGCAGTTGCGCCCGCGCCTGGATGCATTGGTGCGCAATGGTGACTTGCTCGGTTACGACATGGCGGCGCGCT ATCTGCCCAGCGCCAAGACCCAGCATGCGCGGCAGGCGGCGTTGCCCGACGCCGCGCAGGCGCGTGCGTTCACCGAGACT GCTGTCGCCACCACGCCGTTCCGCAGCGATGCGTTTGCGCCGTTCCTGCAGGATCTGGACGCCGCCAAGCGCGCCGCACC GCTGCTGCCGAAGGATCTGACCGGCTCGCCGCTGGCGACCTCGGTCGGTGGTTTGTTGCTGGGCCGTGGCGATCGCAGCA CCGCACTGGTGTCGTTGACCGGCCTGCGCGATCCGGCGGTCCTGGCGGCTGCCGTGCAAGGCAGTGGCGCGCAATTGCTG GATCTGAAGGAAGCCTCCGAATCGTTGGTGGCTGCCTACCGTGGACGCGTGCTCGGTGCGCTGGTATTGGCCGCCTTGTT GCTGGCGGTGACCGTGGCGATCGCACTGCGTAGTCCGCGCCGCATCGTGCGGGTGTTGCTGCCGATGGCGCTGACCACGG TGCTGATCCTGGCGATCCTGCGCGGCACCGGGGTGGAGCTCAATTTGTTCCATCTGATCGCGCTGATCCTGGCCGCCGGC CTGGGCCTGGATTACGCGCTGTTCTTCGATCACGCCGGCGACGATCACGCCGACCAGCTCCGCACGCTGCACGCATTGAT CGTGTGCAGCCTGATGACCCTGCTGGTGTTCGCGTTGTTGGCCGCGTCCAGCATTCCGGTCTTGCGTGCGATCGGCAGCA CGGTGGCGCTGGGCGTGTTGTTCAATTTCATTCTGGCCTTGCTGGTATCGCGCGAACCGGCGCTGGAACGCACCGCGAAT GGAGAGCCGCATGCAGGGACGTGA
Upstream 100 bases:
>100_bases CGGTTCTGGCGCGTGACCGCGCGCGTGATGGGTGCGCCGGTCGTCTCTAAACACATCGCACCATTCGCAGCTGAAACGCG CACGTTGCCGATAACGACCG
Downstream 100 bases:
>100_bases CGCGATTGCCACGCTGATTCCACACCAGGGCAGCATGTGCCTGTGGGAAGACGTGATCGAGTGGGATGCGCAGCGCATCG TGCTGCGTAGTCACGCGCAT
Product: putative inner membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 807; Mature: 806
Protein sequence:
>807_residues MPRLRPACVRPLQQDTHTMALELNANRRIGLALLWLALLAVAGFWLSETLKVTGDLRKFMPAPRTPAQKLLIEELGEGPG SRLLLMALSNSDPVTLAEQSQQLQKALAAQPELFELVGNGGNAGLEAIPKRLLPYRYLLSDSFDKTPLDAPTLEAALQAR VQDLGSPAAAMVEPLLPRDPTMEILHLAETLQPAAMPQTRNDVWFDRAGTSALLIVQTRAAGFDPTGQQLAYDAVQAAFA KVSKGTSTRLTLTGPGAFAVEITARTQGEAQWIGTLDTVGLVLLLLVAYRSWKIPVLGVLPLASAGLAGLGAVAVLFDGV HGITVAFGFTLIGVVQDYPIHLFSHQRPGLDPRENARHLWPTLVTGVVSTCIAYVTFLFSGVDGLRQLAVFTIAGLATAA VTTRWMLPALIDPAPRDYADSRLLAVLWRGVARLPRPRIVSLAVMAVLSIAVIVLAPGQFWQNDLSKLTPVPPKALAQDM HLRQELGAPDVRYVLALPAANDEAALQASEQLRPRLDALVRNGDLLGYDMAARYLPSAKTQHARQAALPDAAQARAFTET AVATTPFRSDAFAPFLQDLDAAKRAAPLLPKDLTGSPLATSVGGLLLGRGDRSTALVSLTGLRDPAVLAAAVQGSGAQLL DLKEASESLVAAYRGRVLGALVLAALLLAVTVAIALRSPRRIVRVLLPMALTTVLILAILRGTGVELNLFHLIALILAAG LGLDYALFFDHAGDDHADQLRTLHALIVCSLMTLLVFALLAASSIPVLRAIGSTVALGVLFNFILALLVSREPALERTAN GEPHAGT
Sequences:
>Translated_807_residues MPRLRPACVRPLQQDTHTMALELNANRRIGLALLWLALLAVAGFWLSETLKVTGDLRKFMPAPRTPAQKLLIEELGEGPG SRLLLMALSNSDPVTLAEQSQQLQKALAAQPELFELVGNGGNAGLEAIPKRLLPYRYLLSDSFDKTPLDAPTLEAALQAR VQDLGSPAAAMVEPLLPRDPTMEILHLAETLQPAAMPQTRNDVWFDRAGTSALLIVQTRAAGFDPTGQQLAYDAVQAAFA KVSKGTSTRLTLTGPGAFAVEITARTQGEAQWIGTLDTVGLVLLLLVAYRSWKIPVLGVLPLASAGLAGLGAVAVLFDGV HGITVAFGFTLIGVVQDYPIHLFSHQRPGLDPRENARHLWPTLVTGVVSTCIAYVTFLFSGVDGLRQLAVFTIAGLATAA VTTRWMLPALIDPAPRDYADSRLLAVLWRGVARLPRPRIVSLAVMAVLSIAVIVLAPGQFWQNDLSKLTPVPPKALAQDM HLRQELGAPDVRYVLALPAANDEAALQASEQLRPRLDALVRNGDLLGYDMAARYLPSAKTQHARQAALPDAAQARAFTET AVATTPFRSDAFAPFLQDLDAAKRAAPLLPKDLTGSPLATSVGGLLLGRGDRSTALVSLTGLRDPAVLAAAVQGSGAQLL DLKEASESLVAAYRGRVLGALVLAALLLAVTVAIALRSPRRIVRVLLPMALTTVLILAILRGTGVELNLFHLIALILAAG LGLDYALFFDHAGDDHADQLRTLHALIVCSLMTLLVFALLAASSIPVLRAIGSTVALGVLFNFILALLVSREPALERTAN GEPHAGT >Mature_806_residues PRLRPACVRPLQQDTHTMALELNANRRIGLALLWLALLAVAGFWLSETLKVTGDLRKFMPAPRTPAQKLLIEELGEGPGS RLLLMALSNSDPVTLAEQSQQLQKALAAQPELFELVGNGGNAGLEAIPKRLLPYRYLLSDSFDKTPLDAPTLEAALQARV QDLGSPAAAMVEPLLPRDPTMEILHLAETLQPAAMPQTRNDVWFDRAGTSALLIVQTRAAGFDPTGQQLAYDAVQAAFAK VSKGTSTRLTLTGPGAFAVEITARTQGEAQWIGTLDTVGLVLLLLVAYRSWKIPVLGVLPLASAGLAGLGAVAVLFDGVH GITVAFGFTLIGVVQDYPIHLFSHQRPGLDPRENARHLWPTLVTGVVSTCIAYVTFLFSGVDGLRQLAVFTIAGLATAAV TTRWMLPALIDPAPRDYADSRLLAVLWRGVARLPRPRIVSLAVMAVLSIAVIVLAPGQFWQNDLSKLTPVPPKALAQDMH LRQELGAPDVRYVLALPAANDEAALQASEQLRPRLDALVRNGDLLGYDMAARYLPSAKTQHARQAALPDAAQARAFTETA VATTPFRSDAFAPFLQDLDAAKRAAPLLPKDLTGSPLATSVGGLLLGRGDRSTALVSLTGLRDPAVLAAAVQGSGAQLLD LKEASESLVAAYRGRVLGALVLAALLLAVTVAIALRSPRRIVRVLLPMALTTVLILAILRGTGVELNLFHLIALILAAGL GLDYALFFDHAGDDHADQLRTLHALIVCSLMTLLVFALLAASSIPVLRAIGSTVALGVLFNFILALLVSREPALERTANG EPHAGT
Specific function: Unknown
COG id: COG4258
COG function: function code R; Predicted exporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85856; Mature: 85725
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLRPACVRPLQQDTHTMALELNANRRIGLALLWLALLAVAGFWLSETLKVTGDLRKFM CCCCCHHHHCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PAPRTPAQKLLIEELGEGPGSRLLLMALSNSDPVTLAEQSQQLQKALAAQPELFELVGNG CCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHCCCCHHHHHHCCC GNAGLEAIPKRLLPYRYLLSDSFDKTPLDAPTLEAALQARVQDLGSPAAAMVEPLLPRDP CCCCHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC TMEILHLAETLQPAAMPQTRNDVWFDRAGTSALLIVQTRAAGFDPTGQQLAYDAVQAAFA HHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHH KVSKGTSTRLTLTGPGAFAVEITARTQGEAQWIGTLDTVGLVLLLLVAYRSWKIPVLGVL HHCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHH PLASAGLAGLGAVAVLFDGVHGITVAFGFTLIGVVQDYPIHLFSHQRPGLDPRENARHLW HHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHCHHHHH PTLVTGVVSTCIAYVTFLFSGVDGLRQLAVFTIAGLATAAVTTRWMLPALIDPAPRDYAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH SRLLAVLWRGVARLPRPRIVSLAVMAVLSIAVIVLAPGQFWQNDLSKLTPVPPKALAQDM HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHH HLRQELGAPDVRYVLALPAANDEAALQASEQLRPRLDALVRNGDLLGYDMAARYLPSAKT HHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHH QHARQAALPDAAQARAFTETAVATTPFRSDAFAPFLQDLDAAKRAAPLLPKDLTGSPLAT HHHHHHCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH SVGGLLLGRGDRSTALVSLTGLRDPAVLAAAVQGSGAQLLDLKEASESLVAAYRGRVLGA HHCCCEEECCCCCEEEEEEECCCCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHH LVLAALLLAVTVAIALRSPRRIVRVLLPMALTTVLILAILRGTGVELNLFHLIALILAAG HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHC LGLDYALFFDHAGDDHADQLRTLHALIVCSLMTLLVFALLAASSIPVLRAIGSTVALGVL CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FNFILALLVSREPALERTANGEPHAGT HHHHHHHHHCCCCHHHHCCCCCCCCCC >Mature Secondary Structure PRLRPACVRPLQQDTHTMALELNANRRIGLALLWLALLAVAGFWLSETLKVTGDLRKFM CCCCHHHHCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PAPRTPAQKLLIEELGEGPGSRLLLMALSNSDPVTLAEQSQQLQKALAAQPELFELVGNG CCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHCCCCHHHHHHCCC GNAGLEAIPKRLLPYRYLLSDSFDKTPLDAPTLEAALQARVQDLGSPAAAMVEPLLPRDP CCCCHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC TMEILHLAETLQPAAMPQTRNDVWFDRAGTSALLIVQTRAAGFDPTGQQLAYDAVQAAFA HHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHH KVSKGTSTRLTLTGPGAFAVEITARTQGEAQWIGTLDTVGLVLLLLVAYRSWKIPVLGVL HHCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHH PLASAGLAGLGAVAVLFDGVHGITVAFGFTLIGVVQDYPIHLFSHQRPGLDPRENARHLW HHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHCHHHHH PTLVTGVVSTCIAYVTFLFSGVDGLRQLAVFTIAGLATAAVTTRWMLPALIDPAPRDYAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH SRLLAVLWRGVARLPRPRIVSLAVMAVLSIAVIVLAPGQFWQNDLSKLTPVPPKALAQDM HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHH HLRQELGAPDVRYVLALPAANDEAALQASEQLRPRLDALVRNGDLLGYDMAARYLPSAKT HHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHH QHARQAALPDAAQARAFTETAVATTPFRSDAFAPFLQDLDAAKRAAPLLPKDLTGSPLAT HHHHHHCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH SVGGLLLGRGDRSTALVSLTGLRDPAVLAAAVQGSGAQLLDLKEASESLVAAYRGRVLGA HHCCCEEECCCCCEEEEEEECCCCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHH LVLAALLLAVTVAIALRSPRRIVRVLLPMALTTVLILAILRGTGVELNLFHLIALILAAG HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHC LGLDYALFFDHAGDDHADQLRTLHALIVCSLMTLLVFALLAASSIPVLRAIGSTVALGVL CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FNFILALLVSREPALERTANGEPHAGT HHHHHHHHHCCCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA