Click here to switch to the map view.

The map label for this gene is 84625719

Identifier: 84625719

GI number: 84625719

Start: 4584575

End: 4585252

Strand: Reverse

Name: 84625719

Synonym: XOO_4062

Alternate gene names: NA

Gene position: 4585252-4584575 (Counterclockwise)

Preceding gene: 84625720

Following gene: 84625716

Centisome position: 92.81

GC content: 66.08

Gene sequence:

>678_bases
ATGAAGAAGAGAGACGGACGTTTGGTATCGCGGGCGGCGCTGGAAGAAATGCGCCTGATGGCGTTGCAACGGATGGGCGA
AGGCGAATCGCCGGCCGAAGTGGCCGCGTCGTTCGGATTGCATCGCGGCTGGGCGTACAAAGTGCTGGCGCGAGCACAGG
AGGGCGGCGCTGGCGCATTGATGACGCGTAAGGGCAGCGGTCGCCCGCGGACGTTGACGCCGGCGCAGGAGCGCCAGGTG
TTCGGCTGGGTCAATGGCAAGAACCCTCGCCAGCATGGCTTCGCCTTCGGTCTGTGGACGCGGCAGGTCGTGCGAGAACT
GATCGAGAAGAAATGTGCCGCACGGTTGAGTCTGGCCAGCGTCGGGACGTTGCTGGCGCGGCTGGGGCTGAGCCCACAGA
AGCCGCTGCAACACGCCTATCAGCGCGATCCACTGGCGGTAGCACAGTGGCAGGAGCAGACGTCCCCGGCGATCGTGAAG
CACGCCAAGCAGGAAAAGGCCGAGATTGACTTCTGGGACGCGTCTGGCTTCCGTGCCGATGCGGTGCAAGGACGGACGTG
GGCCGTCAAGGGCGTCACCCCGGTTGTCGCGGTGCCGGGGCAGCGCCAGAGCATCAGTGCGGCCTCGGCGGGAACAGCAA
GGGCGGGTTCTGGTTCGCCGTGTACAGCGGCGGCTTGA

Upstream 100 bases:

>100_bases
GCACCCACCTGACGACTGCTCGCTACGTTTTGTTAGCCGCTCTTACTAATAAGTCAGTAAATTAGGGAGCGGATGTTGAC
GTCATGCTGTCCAACCATCC

Downstream 100 bases:

>100_bases
ACGGTGAATTGTTCGTGGACCTGCTCAAGCGAATGGATGAAAGGCCGTCGCCGTCCAATCCATCTGGTGCTTGATGGTTT
GCCTGCTCACAAGACCCGTG

Product: ISXoo2 transposase

Products: NA

Alternate protein names: Transposase And Inactivated Derivatives; ISXo7 Transposase; ISXoo2 Transposase; Helix-Turn-Helix Type; Transposase IS; Transposase Of IS; Transposase And Inactivated Derivatives-Like Protein; Cation Diffusion Facilitator Family Transporter; Isxo7 Transposase; Transposase Fragmentary Gene

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MKKRDGRLVSRAALEEMRLMALQRMGEGESPAEVAASFGLHRGWAYKVLARAQEGGAGALMTRKGSGRPRTLTPAQERQV
FGWVNGKNPRQHGFAFGLWTRQVVRELIEKKCAARLSLASVGTLLARLGLSPQKPLQHAYQRDPLAVAQWQEQTSPAIVK
HAKQEKAEIDFWDASGFRADAVQGRTWAVKGVTPVVAVPGQRQSISAASAGTARAGSGSPCTAAA

Sequences:

>Translated_225_residues
MKKRDGRLVSRAALEEMRLMALQRMGEGESPAEVAASFGLHRGWAYKVLARAQEGGAGALMTRKGSGRPRTLTPAQERQV
FGWVNGKNPRQHGFAFGLWTRQVVRELIEKKCAARLSLASVGTLLARLGLSPQKPLQHAYQRDPLAVAQWQEQTSPAIVK
HAKQEKAEIDFWDASGFRADAVQGRTWAVKGVTPVVAVPGQRQSISAASAGTARAGSGSPCTAAA
>Mature_225_residues
MKKRDGRLVSRAALEEMRLMALQRMGEGESPAEVAASFGLHRGWAYKVLARAQEGGAGALMTRKGSGRPRTLTPAQERQV
FGWVNGKNPRQHGFAFGLWTRQVVRELIEKKCAARLSLASVGTLLARLGLSPQKPLQHAYQRDPLAVAQWQEQTSPAIVK
HAKQEKAEIDFWDASGFRADAVQGRTWAVKGVTPVVAVPGQRQSISAASAGTARAGSGSPCTAAA

Specific function: Unknown

COG id: COG3415

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24222; Mature: 24222

Theoretical pI: Translated: 11.39; Mature: 11.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRDGRLVSRAALEEMRLMALQRMGEGESPAEVAASFGLHRGWAYKVLARAQEGGAGAL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEE
MTRKGSGRPRTLTPAQERQVFGWVNGKNPRQHGFAFGLWTRQVVRELIEKKCAARLSLAS
EEECCCCCCCCCCCHHHCEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VGTLLARLGLSPQKPLQHAYQRDPLAVAQWQEQTSPAIVKHAKQEKAEIDFWDASGFRAD
HHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCCCCC
AVQGRTWAVKGVTPVVAVPGQRQSISAASAGTARAGSGSPCTAAA
CCCCCEEEECCCCEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKRDGRLVSRAALEEMRLMALQRMGEGESPAEVAASFGLHRGWAYKVLARAQEGGAGAL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEE
MTRKGSGRPRTLTPAQERQVFGWVNGKNPRQHGFAFGLWTRQVVRELIEKKCAARLSLAS
EEECCCCCCCCCCCHHHCEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VGTLLARLGLSPQKPLQHAYQRDPLAVAQWQEQTSPAIVKHAKQEKAEIDFWDASGFRAD
HHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCCCCC
AVQGRTWAVKGVTPVVAVPGQRQSISAASAGTARAGSGSPCTAAA
CCCCCEEEECCCCEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA