Click here to switch to the map view.

The map label for this gene is cirA [C]

Identifier: 84625698

GI number: 84625698

Start: 4557871

End: 4558806

Strand: Reverse

Name: cirA [C]

Synonym: XOO_4041

Alternate gene names: 84625698

Gene position: 4558806-4557871 (Counterclockwise)

Preceding gene: 84625700

Following gene: 84625697

Centisome position: 92.28

GC content: 63.57

Gene sequence:

>936_bases
GTGACTGCGCTCTATGGCATTTCACCGGCGATGGCGCAACAAACCACAGACCTCGGCGAAGTGGTTGTCACCGGCTCGCG
CATCAAACGCGCGCAGGTTGAAGGCGCGCAGCCGGTGGTCACCATCAGCGCGCAGCAGATCCAGCAGGAAGGCTTCGCCA
CCGTCTACGGCGTGCTCAACAGCATGAATCAGCAGGGCTCGGTGGAAGCCGATACGCAGTGGGGCTCGCATACGCCCAAT
GCCTGGCCGATCAATCTGCGCGATTTGGGGCCGGGCCGTACCCTGCAGCTGGTCAACGGCCATCGCGTAGCCCATTACCC
GCTGCCCTACGGCGGCGAAAGCAATTTCTCCAACTACAGCAATATTCCCTCCGCAGCCGTGGAGCGCATGGACATGCTCA
CCGGCGGTTCGTCGGCGATCTACGGCTCCGATGCAGTGGCCGGCGTGATCAACGTGATCCTCAAGTGCGACTACCAGGGC
GACCACGTGCGGTTGCGCGGTGGCACCGCGACCGAAGGTGGACGCGATAGTTTCGACGTGTCGTGGGCCGGCGGGCGCAC
CGGCGAGAACTGGAGCCTGACCTACGCGCTGCAGGCCACCAAGCGCGACTCATTGAGCGGACGCGATCGCCCTAGGATGG
ACGATGCGCACGACATGTCTTATTCCAATTGGACCGGGCAGAACCGCTTGTACGGCTTCAATCCGTTCACCGGTATGAGC
CTGATCGATGCCAATACCAACGCGCGCCTGGCGCCGCCGGCCGGCACCTGCGCGCGCTTGGGCAGCGAGTTCATCGACGG
GCAACGTCTGAGCTACAACCAGAACACCGGCGCGCTCACCAACGCCGGCAGTTACTGCGGCGTGGCACACGATGATGGCG
ACTGGGGTCTGGTCACCGGCAGTGAGGACTATACGGCGTCTCTCTATGGCACCTGA

Upstream 100 bases:

>100_bases
CGCACTGGGTATGCCGTGATCGACGACGTCTCTTTTCTAGACCTAAATCGGGGACTCCAGCATGCACCGTTACCAACGGG
CTCTTCTCGCGTTCTGCACT

Downstream 100 bases:

>100_bases
AAGTTCGGCGAACACACCGAAGCCTGTGTCACGCTATCGGCCAATCGCAGCATCGGCCGCTGGACCTACGACCCGCCTTA
CGCCTATCTGGGCCCGTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NB Dependent Receptor Protein; NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; Nb-Dependent Outer Membrane Receptor Protein; Outer Membrane Protein; Outer Membrane Receptor Protein; Nb-Dependent Receptor; NB-Dependent Receptor Domain Protein; NB-Dependent Receptor Plug Domain Protein; NB Dependent Receptor; NB-Dependent Receptor-Like Protein; NB-Dependent Receptor Protein; Vitamin; Fe Transporter; NB-Dependent Receptor Domain-Containing Protein; NB-Dependent Receptor With TonB-Box; Nb-Dependent Receptor Plug

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MTALYGISPAMAQQTTDLGEVVVTGSRIKRAQVEGAQPVVTISAQQIQQEGFATVYGVLNSMNQQGSVEADTQWGSHTPN
AWPINLRDLGPGRTLQLVNGHRVAHYPLPYGGESNFSNYSNIPSAAVERMDMLTGGSSAIYGSDAVAGVINVILKCDYQG
DHVRLRGGTATEGGRDSFDVSWAGGRTGENWSLTYALQATKRDSLSGRDRPRMDDAHDMSYSNWTGQNRLYGFNPFTGMS
LIDANTNARLAPPAGTCARLGSEFIDGQRLSYNQNTGALTNAGSYCGVAHDDGDWGLVTGSEDYTASLYGT

Sequences:

>Translated_311_residues
MTALYGISPAMAQQTTDLGEVVVTGSRIKRAQVEGAQPVVTISAQQIQQEGFATVYGVLNSMNQQGSVEADTQWGSHTPN
AWPINLRDLGPGRTLQLVNGHRVAHYPLPYGGESNFSNYSNIPSAAVERMDMLTGGSSAIYGSDAVAGVINVILKCDYQG
DHVRLRGGTATEGGRDSFDVSWAGGRTGENWSLTYALQATKRDSLSGRDRPRMDDAHDMSYSNWTGQNRLYGFNPFTGMS
LIDANTNARLAPPAGTCARLGSEFIDGQRLSYNQNTGALTNAGSYCGVAHDDGDWGLVTGSEDYTASLYGT
>Mature_310_residues
TALYGISPAMAQQTTDLGEVVVTGSRIKRAQVEGAQPVVTISAQQIQQEGFATVYGVLNSMNQQGSVEADTQWGSHTPNA
WPINLRDLGPGRTLQLVNGHRVAHYPLPYGGESNFSNYSNIPSAAVERMDMLTGGSSAIYGSDAVAGVINVILKCDYQGD
HVRLRGGTATEGGRDSFDVSWAGGRTGENWSLTYALQATKRDSLSGRDRPRMDDAHDMSYSNWTGQNRLYGFNPFTGMSL
IDANTNARLAPPAGTCARLGSEFIDGQRLSYNQNTGALTNAGSYCGVAHDDGDWGLVTGSEDYTASLYGT

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33266; Mature: 33135

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALYGISPAMAQQTTDLGEVVVTGSRIKRAQVEGAQPVVTISAQQIQQEGFATVYGVLN
CCEEECCCHHHHHHHCCCCEEEEECCHHEEEECCCCCEEEEEEHHHHHHCCHHHHHHHHH
SMNQQGSVEADTQWGSHTPNAWPINLRDLGPGRTLQLVNGHRVAHYPLPYGGESNFSNYS
CCCCCCCEEECCCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEECCCCCCCCCCCCCCC
NIPSAAVERMDMLTGGSSAIYGSDAVAGVINVILKCDYQGDHVRLRGGTATEGGRDSFDV
CCCHHHHHHHHHHCCCCCEEECCHHHHHHHHHHEECCCCCCEEEEECCCCCCCCCCCEEE
SWAGGRTGENWSLTYALQATKRDSLSGRDRPRMDDAHDMSYSNWTGQNRLYGFNPFTGMS
EECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCE
LIDANTNARLAPPAGTCARLGSEFIDGQRLSYNQNTGALTNAGSYCGVAHDDGDWGLVTG
EEECCCCCEECCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEECCCCEEEEEC
SEDYTASLYGT
CCCCEEEECCC
>Mature Secondary Structure 
TALYGISPAMAQQTTDLGEVVVTGSRIKRAQVEGAQPVVTISAQQIQQEGFATVYGVLN
CEEECCCHHHHHHHCCCCEEEEECCHHEEEECCCCCEEEEEEHHHHHHCCHHHHHHHHH
SMNQQGSVEADTQWGSHTPNAWPINLRDLGPGRTLQLVNGHRVAHYPLPYGGESNFSNYS
CCCCCCCEEECCCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEECCCCCCCCCCCCCCC
NIPSAAVERMDMLTGGSSAIYGSDAVAGVINVILKCDYQGDHVRLRGGTATEGGRDSFDV
CCCHHHHHHHHHHCCCCCEEECCHHHHHHHHHHEECCCCCCEEEEECCCCCCCCCCCEEE
SWAGGRTGENWSLTYALQATKRDSLSGRDRPRMDDAHDMSYSNWTGQNRLYGFNPFTGMS
EECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCE
LIDANTNARLAPPAGTCARLGSEFIDGQRLSYNQNTGALTNAGSYCGVAHDDGDWGLVTG
EEECCCCCEECCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEECCCCEEEEEC
SEDYTASLYGT
CCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA